#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 13 141-142-133-124-55-116-108-9
1 IL_6CZR_3646CZR0.101401a SSU rRNAG865G866A867G868U869A870C871G872*U883G884A885A886A887C888cWWtSHntHHncSHtWHntHSncWW
2 IL_4LFB_0344LFB0.000008x6 Sarcin-Ricin with inserted Y; G-bulgeA SSU rRNAG887G888A889G890U891A892C893G894*U905G906A907A908A909C910cWWtSHtHHcSHtWHtHScWW
3 IL_5J7L_0385J7L0.094508x6 Sarcin-Ricin with inserted Y; G-bulgeAA SSU rRNAG887G888A889G890U891A892C893G894*U905A906A907A908A909C910cWWtSHtHHcSHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGAGUACG*UGAAAC2
GGAGUACG*UAAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GAGUAC*GAAA2
GAGUAC*AAAA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • 8x6 Sarcin-Ricin with inserted Y; G-bulge (2)
  • (1)
  • Basepair signature
    cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
    Heat map statistics
    Min 0.09 | Avg 0.07 | Max 0.13
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