Motif IL_79846.1 Version IL_79846.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | break | 17 | 18 | 19 | 1-19 | 3-8 | 11-12 | 11-13 | 15-18 | 16-17 | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3Q3Z_005 | 3Q3Z | 0.0000 | 0 | V | Cyclic di-GMP-II riboswitch | U | 60 | A | 61 | G | 62 | U | 63 | A | 64 | G | 65 | U | 66 | G | 67 | C | 68 | A | 69 | A | 70 | C | 71 | C | 72 | G | 73 | A | 74 | C | 75 | * | G | 12 | A | 13 | A | 14 | ncWW | tWH | cSH | ncSH | cWw | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UAGUAGUGCAACCGAC*GAA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AGUAGUGCAACCGA*A | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-L-L-tWH-cWW-L-L-L-R-L-R-cSH-L-L
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: