#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4 51-52-3
1 IL_4IOA_0234IOA0.00000X LSU rRNAU860G861*U942U943A944cWWcWW
2 IL_3U5F_0203U5F0.68403618S rRNAU345G346*U318U319A323cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UG*UUA1
UG*UUUCGA1
Non-Watson-Crick part of the motif
SequenceCounts
*U1
*UUCG1

Release history

Release1.91.101.11
Date2013-12-072014-01-042014-02-01
StatusUpdated, 1 parentExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_80348.2Only in the parent motif
IL_80348.1
Compare
IL_4IOA_023, IL_3U5F_020IL_1FJG_012

Children motifs

Child motifCommon motif instancesOnly in IL_80348.2Only in the child motif
IL_80348.3
Compare
IL_4IOA_023, IL_3U5F_020IL_1FJG_012
Annotations
  • (2)
  • Basepair signature
    cWW-R-cWW
    Heat map statistics
    Min 0.68 | Avg 0.34 | Max 0.68
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1141 s