#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 4 5 6 71-72-32-63-5
1 IL_1FJG_0371FJG0.00001Minor groove platform (H)A SSU rRNAG933A935*U1380U1381C1382C1383C1384cWWcWWcSWcSH
2 IL_1FJG_0391FJG0.48580Minor groove platform (H)A SSU rRNAA1044C1045*G993A994C995A996U997cWWcWWcSW

3D structures

Complete motif including flanking bases
SequenceCounts
GCA*UUCCC1
AC*GACAU1
Non-Watson-Crick part of the motif
SequenceCounts
C*UCC1
*ACA1

Release history

Release0.20.3
Date2011-12-082011-12-08
StatusNew id, 2 parentsExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_90628.1Only in the parent motif
IL_75582.1
Compare
IL_1FJG_037IL_1FJG_039
IL_19775.1
Compare
IL_1FJG_039IL_1FJG_037IL_1FJG_046, IL_1S72_066

Children motifs

Child motifCommon motif instancesOnly in IL_90628.1Only in the child motif
IL_87014.1
Compare
IL_1FJG_039IL_1FJG_037IL_3F1H_068, IL_2ZJR_027, IL_2ZJR_003, IL_3F1H_056, IL_2ZJR_067, IL_1FJG_051, IL_1S72_066
IL_40845.1
Compare
IL_1FJG_037IL_1FJG_039
Annotations
  • Minor groove platform (H) (2)
  • Basepair signature
    Heat map statistics
    Min 0.49 | Avg 0.24 | Max 0.49
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