Motif IL_90991.5 Version IL_90991.5 of this group appears in releases 3.54 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_030 | 4V9F | 0.1203 | 4 | Multiple bulged bases | 0 | LSU rRNA | G | 868 | G | 870 | * | C | 880 | C | 884 | cWW | cWW |
| 2 | IL_7RQB_023 | 7RQB | 0.0000 | 4 | Multiple bulged bases | 1A | LSU rRNA | G | 775 | A | 777 | * | U | 787 | C | 791 | cWW | cWW |
| 3 | IL_4WF9_027 | 4WF9 | 0.1519 | 4 | Multiple bulged bases | X | LSU rRNA | G | 820 | G | 822 | * | C | 832 | C | 836 | cWW | cWW |
| 4 | IL_7A0S_021 | 7A0S | 0.1464 | 4 | Multiple bulged bases | X | LSU rRNA | G | 788 | A | 790 | * | U | 800 | C | 804 | cWW | cWW |
| 5 | IL_5J7L_265 | 5J7L | 0.1455 | 4 | Multiple bulged bases | DA | LSU rRNA | G | 775 | G | 777 | * | C | 787 | C | 791 | cWW | cWW |
| 6 | IL_5TBW_033 | 5TBW | 0.1694 | 4 | Multiple bulged bases | 1 | LSU rRNA | G | 907 | G | 909 | * | U | 919 | C | 923 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGA*UAACC | 2 |
| GGG*CCAUC | 1 |
| GCG*CAAUC | 1 |
| GGG*CAAUC | 1 |
| GGG*UAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*AAC | 2 |
| G*AAU | 2 |
| G*CAU | 1 |
| C*AAU | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 | 2023-12-06 | 2024-01-03 | 2024-01-03 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (6)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.10 | Avg 0.12 | Max 0.21
Coloring options: