#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 8 91-92-83-63-74-56-7
1 IL_1FJG_0551FJG0.00000A SSU rRNAG1401C1402C1403C1404*G1497U1498A1499A1500C1501cWWcWWcSWcWWcSH
2 IL_2FQN_0022FQN1.64450A+BRNA (23-mer)C7G8C9U10*A38A39A40A41G42cWWcWWacWW
3 IL_2O3Y_0022O3Y1.68670Decoding loop relatedA+BRNA (23-mer)C7G8C9U10*A38A39A40A41G42cWWcWWacWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGCU*AAAAG2
GCCC*GUAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GC*AAA2
CC*UAA1

Release history

Release0.20.3
Date2011-12-082011-12-08
StatusUpdated, 2 parentsExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_97453.2Only in the parent motif
IL_97453.1
Compare
IL_2FQN_002, IL_2O3Y_002IL_1FJG_055
IL_58589.1
Compare
IL_1FJG_055IL_2FQN_002, IL_2O3Y_002

Children motifs

Child motifCommon motif instancesOnly in IL_97453.2Only in the child motif
IL_75673.1
Compare
IL_1FJG_055IL_2FQN_002, IL_2O3Y_002IL_3BNQ_008, IL_1FJG_008, IL_3BNQ_002, IL_2O3V_002
IL_70339.1
Compare
IL_2O3Y_002IL_2FQN_002, IL_1FJG_055IL_429D_002
IL_22078.1
Compare
IL_2FQN_002IL_1FJG_055, IL_2O3Y_002
Annotations
  • (2)
  • Decoding loop related (1)
  • Basepair signature
    Heat map statistics
    Min 0.14 | Avg 0.77 | Max 1.69
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