#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8break 9 10 11 121-122-42-113-104-115-68-9
1 J3_6CZR_0776CZR0.267911a SSU rRNAU735G736A737C738G739*C570G571G572*C635U636G638A639cWWtHWcWWcWWncWW
2 J3_4LFB_0154LFB0.08771A SSU rRNAU751G752A753C754G755*C586G587G588*C651U652G654A655cWWtSHtHWcWWcWWcWW
3 J3_5J7L_0515J7L0.00001AA SSU rRNAU751G752A753C754G755*C586G587G588*C651U652G654A655cWWncSHtSHtHWcWWcWWcWW
4 J3_1KUQ_0021KUQ0.10801B16S RIBOSOMAL RNA FRAGMENTU50G51A52C53G54*C4G5G6*C15U16G18A19cWWncSHtSHtHWcWWcWWcWW
5 J3_1G1X_0051G1X0.14331E+D16S RIBOSOMAL RNAU751G752A753C754G755*C586G587G588*C651U652G654A655cWWncSHtSHtHWcWWcWWcWW
6 J3_4V88_0814V880.44722A6 SSU rRNAC962A963U964U965A966*U633G634A635*U861A862A865G866cWWntHScWWcWWcWW
7 J3_8C3A_0348C3A0.58652CM SSU rRNAC947A948U949U950A951*U631G632A633*U846A847A850G851cWWntSWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGG*CUAGA*UGACG4
UGA*UAAUAG*CAUUA2
CGG*CUUGA*UGACG1
Non-Watson-Crick part of the motif
SequenceCounts
G*UAG*GAC4
G*AAUA*AUU2
G*UUG*GAC1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (7)
  • Basepair signature
    cWW-tSH-cWW-tHW-cWW-cWW-F
    Heat map statistics
    Min 0.09 | Avg 0.31 | Max 0.62
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