1F84 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1F84_001 | 1/A/12:19 | No text annotation | ||
| HL_1F84_026 | 2/A/11:20 | No text annotation | ||
| HL_1F84_002 | 2/A/12:19 | No text annotation | ||
| HL_1F84_003 | 3/A/12:19 | No text annotation | geometric HL_4WF9_011 HL_75660.9 | |
| HL_1F84_004 | 4/A/12:19 | No text annotation | geometric HL_8G9Z_001 HL_75660.9 | |
| HL_1F84_005 | 5/A/12:19 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_1F84_028 | 6/A/4:26 | No text annotation | ||
| HL_1F84_006 | 6/A/11:20 | No text annotation | geometric HL_1KH6_003 HL_33487.2 | |
| HL_1F84_007 | 7/A/12:19 | No text annotation | ||
| HL_1F84_008 | 8/A/12:19 | No text annotation | ||
| HL_1F84_009 | 9/A/12:19 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_1F84_010 | 10/A/12:19 | No text annotation | ||
| HL_1F84_011 | 11/A/12:19 | No text annotation | ||
| HL_1F84_012 | 12/A/12:19 | No text annotation | geometric HL_4V9F_011 HL_75660.9 | |
| HL_1F84_013 | 13/A/12:19 | No text annotation | ||
| HL_1F84_032 | 14/A/11:20 | No text annotation | ||
| HL_1F84_014 | 14/A/12:19 | No text annotation | ||
| HL_1F84_015 | 15/A/12:19 | No text annotation | geometric HL_2Y9H_003 HL_75660.9 | |
| HL_1F84_016 | 16/A/12:19 | No text annotation | ||
| HL_1F84_017 | 17/A/12:19 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_1F84_035 | 18/A/11:20 | No text annotation | geometric HL_8KAH_003 NA | |
| HL_1F84_018 | 18/A/12:19 | No text annotation | geometric HL_5TBW_006 NA | |
| HL_1F84_019 | 19/A/12:19 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_1F84_037 | 20/A/11:20 | No text annotation | geometric HL_8KAH_003 NA | |
| HL_1F84_020 | 20/A/12:19 | No text annotation | ||
| HL_1F84_040 | 21/A/12:19 | No text annotation | ||
| HL_1F84_022 | 22/A/12:19 | No text annotation | ||
| HL_1F84_023 | 23/A/11:20 | No text annotation | geometric HL_8KAH_003 NA | |
| HL_1F84_024 | 24/A/12:19 | No text annotation | ||
| HL_1F84_039 | 25/A/12:19 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1F84_027 | No text annotation | ||
| HL_1F84_029 | No text annotation | ||
| HL_1F84_030 | No text annotation | ||
| HL_1F84_031 | No text annotation | ||
| HL_1F84_033 | No text annotation | ||
| HL_1F84_034 | No text annotation | ||
| HL_1F84_036 | No text annotation | ||
| HL_1F84_021 | No text annotation | ||
| HL_1F84_038 | No text annotation | ||
| HL_1F84_025 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1F84_001 | 1/A/4:10, 1/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_002 | 2/A/4:10, 2/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_003 | 3/A/4:10, 3/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_004 | 4/A/4:10, 4/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_005 | 5/A/4:10, 5/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_006 | 6/A/4:10, 6/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_007 | 7/A/4:10, 7/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_008 | 8/A/4:10, 8/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_009 | 9/A/4:10, 9/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_010 | 10/A/4:10, 10/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_011 | 11/A/4:10, 11/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_012 | 12/A/4:10, 12/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_013 | 13/A/4:10, 13/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_014 | 14/A/4:10, 14/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_015 | 15/A/4:10, 15/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_016 | 16/A/4:10, 16/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_017 | 17/A/4:10, 17/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_018 | 18/A/4:10, 18/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_019 | 19/A/4:10, 19/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_020 | 20/A/4:10, 20/A/21:26 | Sarcin-Ricin target in LSU H95; G-bulge | geometric IL_4V9F_092 IL_02666.2 | |
| IL_1F84_021 | 21/A/4:10, 21/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_022 | 22/A/4:10, 22/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_023 | 23/A/4:10, 23/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_024 | 24/A/4:10, 24/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 | |
| IL_1F84_025 | 25/A/4:10, 25/A/21:26 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_4V9F_007 IL_02666.2 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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