1H3E Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1H3E_009 | 1/B/12:23 | No text annotation | ||
| HL_1H3E_002 | 1/B/31:39 | tRNA anticodon loop | ||
| HL_1H3E_010 | 1/B/47:47 | No text annotation | ||
| HL_1H3E_004 | 1/B/53:61 | T-loop with 2 stacked bulged bases | ||
| HL_1H3E_011 | 1/B/12:23 | No text annotation | ||
| HL_1H3E_006 | 1/B/31:39 | tRNA anticodon loop | geometric HL_5UD5_002 HL_87306.1 | |
| HL_1H3E_012 | 1/B/47:47 | No text annotation | ||
| HL_1H3E_008 | 1/B/53:61 | T-loop with 2 stacked bulged bases | geometric HL_3KFU_006 HL_33597.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1H3E_001 | No text annotation | ||
| HL_1H3E_003 | No text annotation | ||
| HL_1H3E_005 | No text annotation | ||
| HL_1H3E_007 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_1H3E_001 | 1/B/7:10, 1/B/25:26, 1/B/44:45, 1/B/47:49, 1/B/65:66 | No text annotation | homologous J5_2ZZM_001 J5_87118.1 | |
| J5_1H3E_002 | 1/B/7:10, 1/B/25:26, 1/B/44:45, 1/B/47:49, 1/B/65:66 | No text annotation |
Problematic loops
No problematic loops
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