1RFR Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1RFR_001 | 1/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_002 | 2/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_003 | 3/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_004 | 4/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_005 | 5/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_006 | 6/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_007 | 7/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_008 | 8/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_009 | 9/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_010 | 10/A/13:18 | UNCG variation | geometric HL_1P6V_001 NA | |
| HL_1RFR_011 | 11/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_012 | 12/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_013 | 13/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_014 | 14/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_015 | 15/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_016 | 16/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_017 | 17/A/13:18 | UNCG | geometric HL_5J7L_005 NA | |
| HL_1RFR_018 | 18/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_019 | 19/A/13:18 | UNCG | geometric HL_1I6U_001 HL_61337.5 | |
| HL_1RFR_020 | 20/A/13:18 | UNCG | geometric HL_5J7L_005 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1RFR_001 | 1/A/5:9, 1/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_002 | 2/A/5:9, 2/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_003 | 3/A/5:9, 3/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_004 | 4/A/5:9, 4/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_005 | 5/A/5:9, 5/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_006 | 6/A/5:9, 6/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_007 | 7/A/5:9, 7/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_008 | 8/A/5:9, 8/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_009 | 9/A/5:9, 9/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_010 | 10/A/5:9, 10/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_011 | 11/A/5:9, 11/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_012 | 12/A/5:9, 12/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_013 | 13/A/5:9, 13/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_014 | 14/A/5:9, 14/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_015 | 15/A/5:9, 15/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_016 | 16/A/5:9, 16/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_017 | 17/A/5:9, 17/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_018 | 18/A/5:9, 18/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_019 | 19/A/5:9, 19/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 | |
| IL_1RFR_020 | 20/A/5:9, 20/A/22:26 | Triple non-canonical cWW pairs | geometric IL_5BTM_001 IL_71154.4 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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