2CT8 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2CT8_001 | 1/C/13:22 | tRNA D-loop | geometric HL_2CSX_001 HL_49941.1 | |
| HL_2CT8_002 | 1/C/31:39 | No text annotation | geometric HL_2CSX_002 HL_87553.1 | |
| HL_2CT8_003 | 1/C/53:61 | T-loop with 2 stacked bulged bases | geometric HL_2CSX_003 HL_28252.9 | |
| HL_2CT8_004 | 1/D/13:22 | tRNA D-loop | geometric HL_2CSX_001 HL_49941.1 | |
| HL_2CT8_005 | 1/D/31:39 | No text annotation | geometric HL_2CSX_002 HL_87553.1 | |
| HL_2CT8_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases | geometric HL_1QU2_003 HL_28252.9 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_2CT8_003 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | No text annotation | ||
| J4_2CT8_002 | 1/D/7:10, 1/D/25:27, 1/D/43:49, 1/D/65:66 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J4_2CT8_001 | No text annotation |
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