2KYE Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2KYE_001 | 1/A/5:11 | Externally structured | geometric HL_5TBW_022 NA | |
| HL_2KYE_002 | 2/A/5:11 | No text annotation | geometric HL_2Y8W_001 HL_81100.2 | |
| HL_2KYE_003 | 3/A/5:11 | No text annotation | ||
| HL_2KYE_004 | 4/A/5:11 | No text annotation | ||
| HL_2KYE_005 | 5/A/5:11 | No text annotation | ||
| HL_2KYE_006 | 6/A/5:11 | No text annotation | ||
| HL_2KYE_007 | 7/A/5:11 | No text annotation | geometric HL_4KR9_003 HL_70782.2 | |
| HL_2KYE_021 | 8/A/6:10 | No text annotation | ||
| HL_2KYE_009 | 9/A/5:11 | No text annotation | ||
| HL_2KYE_010 | 10/A/5:11 | No text annotation | ||
| HL_2KYE_011 | 11/A/5:11 | No text annotation | ||
| HL_2KYE_012 | 12/A/5:11 | No text annotation | ||
| HL_2KYE_013 | 13/A/5:11 | No text annotation | ||
| HL_2KYE_014 | 14/A/5:11 | No text annotation | ||
| HL_2KYE_015 | 15/A/5:11 | No text annotation | ||
| HL_2KYE_016 | 16/A/5:11 | No text annotation | ||
| HL_2KYE_022 | 17/A/6:10 | No text annotation | ||
| HL_2KYE_018 | 18/A/5:11 | No text annotation | geometric HL_2Y8W_001 HL_81100.2 | |
| HL_2KYE_019 | 19/A/5:11 | No text annotation | ||
| HL_2KYE_020 | 20/A/5:11 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2KYE_008 | No text annotation | ||
| HL_2KYE_017 | No text annotation |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2KYE_001 | Isolated non-canonical cWW pair | ||
| IL_2KYE_002 | Not an internal loop | ||
| IL_2KYE_003 | Isolated non-canonical cWW pair | ||
| IL_2KYE_004 | Stack and bulge | ||
| IL_2KYE_005 | Isolated non-canonical cWW pair | ||
| IL_2KYE_006 | Not an internal loop | ||
| IL_2KYE_007 | Isolated non-canonical cWW pair | ||
| IL_2KYE_008 | Decoding loop related | ||
| IL_2KYE_009 | Isolated non-canonical cWW pair | ||
| IL_2KYE_010 | Not an internal loop | ||
| IL_2KYE_011 | Isolated non-canonical cWW pair | ||
| IL_2KYE_012 | Not an internal loop | ||
| IL_2KYE_013 | Isolated non-canonical cWW pair | ||
| IL_2KYE_014 | Intercalated cWW | ||
| IL_2KYE_015 | Isolated non-canonical cWW pair | ||
| IL_2KYE_016 | Stack and bulge | ||
| IL_2KYE_017 | Isolated non-canonical cWW pair | ||
| IL_2KYE_018 | Not an internal loop | ||
| IL_2KYE_019 | Isolated non-canonical cWW pair | ||
| IL_2KYE_020 | Stack and bulge | ||
| IL_2KYE_021 | Isolated non-canonical cWW pair | ||
| IL_2KYE_022 | Not an internal loop | ||
| IL_2KYE_023 | Isolated non-canonical cWW pair | ||
| IL_2KYE_024 | Stack and bulge | ||
| IL_2KYE_025 | Isolated non-canonical cWW pair | ||
| IL_2KYE_026 | Not an internal loop | ||
| IL_2KYE_027 | Isolated non-canonical cWW pair | ||
| IL_2KYE_028 | Not an internal loop | ||
| IL_2KYE_029 | Isolated non-canonical cWW pair | ||
| IL_2KYE_030 | Not an internal loop | ||
| IL_2KYE_031 | Isolated non-canonical cWW pair | ||
| IL_2KYE_032 | Not an internal loop | ||
| IL_2KYE_033 | Isolated non-canonical cWW pair | ||
| IL_2KYE_034 | Not an internal loop | ||
| IL_2KYE_035 | Isolated non-canonical cWW pair | ||
| IL_2KYE_036 | Not an internal loop | ||
| IL_2KYE_037 | Isolated non-canonical cWW pair | ||
| IL_2KYE_038 | Stack and bulge | ||
| IL_2KYE_039 | Isolated non-canonical cWW pair | ||
| IL_2KYE_040 | Decoding loop related |
Valid loops
No loops found
Problematic loops
No problematic loops
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