2MS1 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2MS1_001 | 1/B/12:23 | No text annotation | ||
| HL_2MS1_002 | 1/B/31:39 | GNRA with extra cWW | geometric HL_4WF9_039 HL_87268.2 | |
| HL_2MS1_003 | 1/B/53:61 | No text annotation | homologous HL_6GSL_222 NA | |
| HL_2MS1_004 | 2/B/12:23 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_2MS1_005 | 2/B/31:39 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_2MS1_006 | 2/B/53:61 | No text annotation | ||
| HL_2MS1_007 | 3/B/12:23 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_2MS1_008 | 3/B/31:39 | No text annotation | geometric HL_8C3A_039 NA | |
| HL_2MS1_009 | 3/B/53:61 | No text annotation | ||
| HL_2MS1_010 | 4/B/12:23 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_2MS1_011 | 4/B/31:39 | No text annotation | ||
| HL_2MS1_012 | 4/B/53:61 | No text annotation | ||
| HL_2MS1_013 | 5/B/12:23 | No text annotation | ||
| HL_2MS1_014 | 5/B/31:39 | No text annotation | geometric HL_361D_002 NA | |
| HL_2MS1_015 | 5/B/53:61 | No text annotation | ||
| HL_2MS1_016 | 6/B/12:23 | No text annotation | ||
| HL_2MS1_017 | 6/B/32:37 | No text annotation | geometric HL_2Y9H_003 HL_75660.8 | |
| HL_2MS1_018 | 6/B/53:61 | No text annotation | ||
| HL_2MS1_019 | 7/B/12:23 | No text annotation | ||
| HL_2MS1_020 | 7/B/31:39 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_2MS1_021 | 7/B/53:61 | No text annotation | ||
| HL_2MS1_022 | 8/B/12:23 | No text annotation | ||
| HL_2MS1_023 | 8/B/31:39 | No text annotation | geometric HL_5TBW_012 NA | |
| HL_2MS1_024 | 8/B/53:61 | No text annotation | ||
| HL_2MS1_025 | 9/B/12:23 | No text annotation | ||
| HL_2MS1_026 | 9/B/31:39 | No text annotation | geometric HL_4WF9_011 HL_75660.8 | |
| HL_2MS1_027 | 9/B/53:61 | No text annotation | ||
| HL_2MS1_028 | 10/B/12:23 | No text annotation | ||
| HL_2MS1_029 | 10/B/31:39 | No text annotation | homologous HL_5HR7_005 HL_50006.5 | |
| HL_2MS1_030 | 10/B/53:61 | No text annotation | homologous HL_6GSL_222 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2MS1_001 | 6/B/31:32, 6/B/37:39 | Single stack bend | geometric IL_5TBW_070 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_2MS1_001 | 1/B/5:10, 1/B/25:26, 1/B/44:49, 1/B/65:68 | No text annotation | ||
| J4_2MS1_002 | 2/B/5:10, 2/B/25:26, 2/B/44:49, 2/B/65:68 | No text annotation | ||
| J4_2MS1_003 | 3/B/5:10, 3/B/25:26, 3/B/44:49, 3/B/65:68 | No text annotation | ||
| J4_2MS1_004 | 4/B/5:10, 4/B/25:26, 4/B/44:49, 4/B/65:68 | No text annotation | ||
| J4_2MS1_005 | 5/B/5:10, 5/B/25:26, 5/B/44:49, 5/B/65:68 | No text annotation | ||
| J4_2MS1_006 | 6/B/5:10, 6/B/25:26, 6/B/44:49, 6/B/65:68 | No text annotation | ||
| J4_2MS1_007 | 7/B/5:10, 7/B/25:26, 7/B/44:49, 7/B/65:68 | No text annotation | ||
| J4_2MS1_008 | 8/B/5:10, 8/B/25:26, 8/B/44:49, 8/B/65:68 | No text annotation | ||
| J4_2MS1_009 | 9/B/5:10, 9/B/25:26, 9/B/44:49, 9/B/65:68 | No text annotation | ||
| J4_2MS1_010 | 10/B/5:10, 10/B/25:26, 10/B/44:49, 10/B/65:68 | No text annotation |
Problematic loops
No problematic loops
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