2NRE Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2NRE_003 | 1/F/53:61 | T-loop with 2 stacked bulged bases | geometric HL_2ZZN_006 HL_33597.3 | |
| HL_2NRE_001 | 1/F/12:23 | tRNA D-loop | geometric HL_3ZGZ_001 HL_18470.2 | |
| HL_2NRE_004 | 1/F/12:23 | tRNA D-loop | geometric HL_3ZGZ_001 HL_18470.2 | |
| HL_2NRE_006 | 1/F/53:61 | T-loop with 2 stacked bulged bases | geometric HL_2ZZN_006 HL_33597.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2NRE_007 | No text annotation | ||
| HL_2NRE_002 | No text annotation | ||
| HL_2NRE_008 | No text annotation | ||
| HL_2NRE_005 | No text annotation |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2NRE_001 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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