3A3A Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3A3A_001 | 1/A/15:20A | tRNA D-loop | homologous HL_3ADD_001 HL_38901.2 | |
| HL_3A3A_002 | 1/A/31:39 | No text annotation | geometric HL_8C3A_039 NA | |
| HL_3A3A_003 | 1/A/47C:47H | GNRA | homologous HL_3RG5_007 HL_37824.8 | |
| HL_3A3A_004 | 1/A/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3ADD_004 HL_28252.9 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3A3A_001 | 1/A/5B:7, 1/A/66:67A | Isolated non-canonical cWW pair | homologous IL_3RG5_002 IL_28037.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_3A3A_001 | 1/A/7:10, 1/A/25:26, 1/A/44:46, 1/A/47:50, 1/A/64:66 | No text annotation | homologous J5_3RG5_002 J5_22280.1 |
Problematic loops
No problematic loops
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