3ADB Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3ADB_001 | 1/C/15:20A | tRNA D-loop | homologous HL_3ADD_001 HL_18141.3 | |
| HL_3ADB_003 | 1/C/47D:47I | GNRA | homologous HL_3W3S_003 HL_34789.5 | |
| HL_3ADB_004 | 1/C/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3ADD_004 HL_33597.4 | |
| HL_3ADB_005 | 1/D/15:20A | tRNA D-loop | homologous HL_3ADD_001 HL_18141.3 | |
| HL_3ADB_006 | 1/D/31:39 | tRNA anticodon loop | homologous HL_3W3S_002 HL_81376.3 | |
| HL_3ADB_007 | 1/D/47D:47I | No text annotation | geometric HL_2Y9H_003 HL_75660.9 | |
| HL_3ADB_008 | 1/D/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3ADD_004 HL_33597.4 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_3ADB_002 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_3ADB_001 | 1/C/7:10, 1/C/25:26, 1/C/44:45, 1/C/48:50, 1/C/64:66 | No text annotation | homologous J5_3ADD_001 J5_90945.1 | |
| J5_3ADB_002 | 1/D/7:10, 1/D/25:26, 1/D/44:45, 1/D/48:50, 1/D/64:66 | No text annotation | homologous J5_3ADD_001 J5_90945.1 |
Problematic loops
No problematic loops
Coloring options: