3FO4 | Motifs

3 Hairpin loops
1 Internal loops
2 Junction loops

Valid loops

Loop id	Location	Annotation; motif group	Mapped info
HL_3FO4_001	1/A/31:39	No text annotation	geometric HL_4FEN_001 HL_20743.5
HL_3FO4_002	1/A/46:53	No text annotation	geometric HL_1Y27_002 HL_31585.4
HL_3FO4_003	1/A/59:67	No text annotation	geometric HL_4FEN_003 HL_73266.9

Problematic loops

No problematic loops

Valid loops

3D	Loop id	Location	Annotation; motif group	Mapped info
	IL_3FO4_001	1/A/25:27, 1/A/43:45	Isolated non-canonical cWW pair	geometric IL_4WF9_042 IL_87907.2

Problematic loops

No problematic loops

Valid loops

3D	Loop id	Location	Annotation; motif group	Mapped info
	J3_3FO4_001	1/A/21:25, 1/A/45:54, 1/A/72:75	No text annotation	geometric J3_1Y27_001 J3_44163.2
	J4_3FO4_001	1/A/21:25, 1/A/45:46, 1/A/53:54, 1/A/72:75	No text annotation

Problematic loops

No problematic loops

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Coloring options: Nucleotide numbers

3FO4 Hairpin, Internal, and multi-helix Junction Loop Motifs

Valid loops

Problematic loops

Valid loops

Problematic loops

Valid loops

Problematic loops