3R4F Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3R4F_001 | 1/A/24:31 | T-loop related HL_77436.5 | ||
| HL_3R4F_005 | 1/A/52:57 | Pseudoknot geometry HL_65794.5 | ||
| HL_3R4F_003 | 1/A/24:31 | T-loop related | geometric HL_3R4F_001 HL_77436.5 | |
| HL_3R4F_006 | 1/A/52:57 | Pseudoknot geometry | geometric HL_3R4F_005 HL_65794.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_3R4F_002 | No text annotation | ||
| HL_3R4F_004 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3R4F_001 | 1/A/14:21, 1/A/34:35 | No text annotation IL_26598.1 | ||
| IL_3R4F_002 | 1/A/14:21, 1/A/34:35 | No text annotation | geometric IL_3R4F_001 IL_26598.1 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3R4F_002 | 1/A/4:6, 1/A/43:47, 1/A/62:63 | phi29 pRNA J3_41097.1 | ||
| J3_3R4F_001 | 1/A/4:6, 1/A/43:47, 1/A/62:63 | phi29 pRNA | geometric J3_3R4F_002 J3_41097.1 |
Problematic loops
No problematic loops
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