3RG5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3RG5_005 | 1/B/15:20A | tRNA D-loop HL_38901.2 | ||
| HL_3RG5_007 | 1/B/47C:47H | GNRA HL_37824.7 | ||
| HL_3RG5_001 | 1/A/15:20A | tRNA D-loop | homologous HL_3RG5_005 HL_38901.2 | |
| HL_3RG5_002 | 1/A/31:39 | No text annotation | ||
| HL_3RG5_003 | 1/A/47C:47H | GNRA | homologous HL_3RG5_007 HL_37824.7 | |
| HL_3RG5_004 | 1/A/53:61 | T-loop with 2 stacked bulged bases | homologous HL_3RG5_008 HL_28252.7 | |
| HL_3RG5_009 | 1/B/15:20A | tRNA D-loop | ||
| HL_3RG5_006 | 1/B/31:39 | tRNA anticodon loop HL_04259.3 | ||
| HL_3RG5_010 | 1/B/31:39 | No text annotation | ||
| HL_3RG5_011 | 1/B/47C:47H | GNRA | ||
| HL_3RG5_008 | 1/B/53:61 | T-loop with 2 stacked bulged bases HL_28252.7 | ||
| HL_3RG5_012 | 1/B/53:61 | T-loop with 2 stacked bulged bases |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_3RG5_002 | 1/B/5B:7, 1/B/66:67A | Isolated non-canonical cWW pair IL_28037.2 | ||
| IL_3RG5_001 | 1/A/5B:7, 1/A/66:67A | Isolated non-canonical cWW pair | homologous IL_3RG5_002 IL_28037.2 | |
| IL_3RG5_003 | 1/B/5B:7, 1/B/66:67A | No text annotation |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J5_3RG5_001 | 1/A/7:10, 1/A/25:26, 1/A/44:46, 1/A/47:50, 1/A/64:66 | No text annotation | homologous J5_3RG5_002 J5_22280.1 | |
| J5_3RG5_002 | 1/B/7:10, 1/B/25:26, 1/B/44:46, 1/B/47:50, 1/B/64:66 | No text annotation J5_22280.1 | ||
| J5_3RG5_003 | 1/B/7:10, 1/B/25:26, 1/B/44:46, 1/B/47:50, 1/B/64:66 | No text annotation |
Problematic loops
No problematic loops
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