3RKF Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3RKF_001 | 1/A/31:39 | No text annotation | geometric HL_3RKF_007 HL_59138.1 | |
| HL_3RKF_002 | 1/A/46:53 | Purine riboswitch | geometric HL_3RKF_008 HL_46333.1 | |
| HL_3RKF_003 | 1/A/59:67 | No text annotation | geometric HL_3RKF_009 HL_09122.1 | |
| HL_3RKF_004 | 1/B/31:39 | No text annotation | geometric HL_3RKF_007 HL_59138.1 | |
| HL_3RKF_005 | 1/B/46:53 | Purine riboswitch | geometric HL_3RKF_008 HL_46333.1 | |
| HL_3RKF_006 | 1/B/59:67 | No text annotation | geometric HL_3RKF_009 HL_09122.1 | |
| HL_3RKF_007 | 1/C/31:39 | No text annotation HL_59138.1 | ||
| HL_3RKF_008 | 1/C/46:53 | Purine riboswitch HL_46333.1 | ||
| HL_3RKF_009 | 1/C/59:67 | No text annotation HL_09122.1 | ||
| HL_3RKF_010 | 1/D/31:39 | No text annotation | geometric HL_3RKF_007 HL_59138.1 | |
| HL_3RKF_011 | 1/D/46:53 | Purine riboswitch | geometric HL_3RKF_008 HL_46333.1 | |
| HL_3RKF_012 | 1/D/59:67 | No text annotation | geometric HL_3RKF_009 HL_09122.1 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_3RKF_001 | 1/A/21:25, 1/A/45:54, 1/A/72:75 | No text annotation | geometric J3_3RKF_003 J3_44163.4 | |
| J3_3RKF_002 | 1/B/21:25, 1/B/45:54, 1/B/72:75 | No text annotation | geometric J3_3RKF_003 J3_44163.4 | |
| J3_3RKF_003 | 1/C/21:25, 1/C/45:54, 1/C/72:75 | No text annotation J3_44163.4 | ||
| J3_3RKF_004 | 1/D/21:25, 1/D/45:54, 1/D/72:75 | No text annotation | geometric J3_3RKF_003 J3_44163.4 | |
| J4_3RKF_001 | 1/A/21:25, 1/A/45:46, 1/A/53:54, 1/A/72:75 | Purine riboswitch junction | homologous J4_3RKF_003 J4_07491.4 | |
| J4_3RKF_002 | 1/B/21:25, 1/B/45:46, 1/B/53:54, 1/B/72:75 | Purine riboswitch junction | homologous J4_3RKF_003 J4_07491.4 | |
| J4_3RKF_003 | 1/C/21:25, 1/C/45:46, 1/C/53:54, 1/C/72:75 | Purine riboswitch junction J4_07491.4 | ||
| J4_3RKF_004 | 1/D/21:25, 1/D/45:46, 1/D/53:54, 1/D/72:75 | Purine riboswitch junction | homologous J4_4LX6_001 J4_07491.4 |
Problematic loops
No problematic loops
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