4QLM Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4QLM_001 | 1/A/54:59 | GNRA HL_34789.3 | ||
| HL_4QLM_002 | 1/A/72:81 | Pseudoknot geometry HL_00911.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4QLM_002 | 1/A/27:32, 1/A/96:101 | No text annotation IL_74322.2 | ||
| IL_4QLM_004 | 1/A/39:40, 1/A/91:94 | Major groove platform; stack outside cWW IL_74641.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4QLM_001 | No text annotation | ||
| IL_4QLM_003 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4QLM_001 | 1/A/43:48, 1/A/65:68, 1/A/85:88 | C-di-AMP riboswitch J3_15893.3 |
Problematic loops
No problematic loops
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