4UE4 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4UE4_001 | No text annotation | ||
| HL_4UE4_002 | No text annotation | ||
| HL_4UE4_003 | GNRA |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4UE4_001 | Double sheared with non-canonical cWW | ||
| IL_4UE4_002 | Single stack bend | ||
| IL_4UE4_003 | No text annotation | ||
| IL_4UE4_004 | No text annotation | ||
| IL_4UE4_005 | Major groove minor groove platform; mini C-loop | ||
| IL_4UE4_006 | Single stack bend | ||
| IL_4UE4_007 | Single stack bend | ||
| IL_4UE4_008 | No text annotation | ||
| IL_4UE4_018 | No text annotation | ||
| IL_4UE4_009 | No text annotation | ||
| IL_4UE4_010 | No text annotation | ||
| IL_4UE4_011 | No text annotation | ||
| IL_4UE4_012 | No text annotation | ||
| IL_4UE4_013 | No text annotation | ||
| IL_4UE4_014 | Minor groove platform with extra cWW | ||
| IL_4UE4_015 | Single stack bend | ||
| IL_4UE4_016 | No text annotation | ||
| IL_4UE4_017 | tSH-tHW-tHS-cWW |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_4UE4_001 | No text annotation | ||
| J3_4UE4_002 | No text annotation |
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