4UE5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4UE5_001 | GNRA-like with tWH | ||
| HL_4UE5_002 | No text annotation | ||
| HL_4UE5_003 | GNRA variation | ||
| HL_4UE5_004 | GNRA |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4UE5_001 | Isolated non-canonical cWW pair | ||
| IL_4UE5_002 | No text annotation | ||
| IL_4UE5_003 | No text annotation | ||
| IL_4UE5_004 | No text annotation | ||
| IL_4UE5_018 | No text annotation | ||
| IL_4UE5_005 | No text annotation | ||
| IL_4UE5_006 | No text annotation | ||
| IL_4UE5_007 | Not an internal loop | ||
| IL_4UE5_008 | No text annotation | ||
| IL_4UE5_009 | No text annotation | ||
| IL_4UE5_010 | No text annotation | ||
| IL_4UE5_011 | No text annotation | ||
| IL_4UE5_012 | No text annotation | ||
| IL_4UE5_013 | Isolated non-canonical cWW pair | ||
| IL_4UE5_014 | Tandem non-canonical cWW pairs | ||
| IL_4UE5_015 | Single bulged A | ||
| IL_4UE5_016 | No text annotation | ||
| IL_4UE5_017 | tSH-tHW-tHS-cWW |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_4UE5_001 | No text annotation | ||
| J3_4UE5_002 | No text annotation |
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