5DDP Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_5DDP_001 | 1/A/11:16 | GNRA HL_37824.8 | ||
| HL_5DDP_002 | 1/A/34:45 | U1 small nuclear ribonucleoprotein A binding hairpin HL_33074.4 | ||
| HL_5DDP_003 | 1/B/11:16 | GNRA | geometric HL_5DDP_001 HL_37824.8 | |
| HL_5DDP_004 | 1/B/34:45 | U1 small nuclear ribonucleoprotein A binding hairpin | geometric HL_6LAX_001 HL_33074.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_5DDP_001 | 1/A/23:29, 1/A/50:60 | 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge IL_20463.1 | ||
| IL_5DDP_002 | 1/B/23:29, 1/B/50:60 | 7x11 Sarcin-Ricin with pseudoknotted region; G-bulge | geometric IL_5DDP_001 IL_20463.1 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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