6YMI Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_6YMI_001 | 1/A/15:24 | No text annotation | geometric HL_6YML_001 HL_35677.4 | |
| HL_6YMI_002 | 1/C/15:24 | No text annotation | geometric HL_6YML_001 HL_35677.4 | |
| HL_6YMI_003 | 1/F/15:24 | No text annotation | geometric HL_6YML_001 HL_35677.4 | |
| HL_6YMI_004 | 1/I/15:24 | No text annotation | geometric HL_6YML_001 HL_35677.4 | |
| HL_6YMI_005 | 1/M/15:24 | No text annotation | geometric HL_6YML_001 HL_35677.4 | |
| HL_6YMI_006 | 1/O/15:24 | No text annotation | geometric HL_6YML_001 HL_35677.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_6YMI_002 | 1/A/12:15, 1/A/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.1 | |
| IL_6YMI_004 | 1/C/12:15, 1/C/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.1 | |
| IL_6YMI_006 | 1/F/12:15, 1/F/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.1 | |
| IL_6YMI_008 | 1/I/12:15, 1/I/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.1 | |
| IL_6YMI_010 | 1/M/12:15, 1/M/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.1 | |
| IL_6YMI_012 | 1/O/12:15, 1/O/24:27 | Double sheared | geometric IL_6YML_002 IL_58355.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6YMI_001 | Stack and bulge | ||
| IL_6YMI_003 | Stack and bulge | ||
| IL_6YMI_005 | Stack and bulge | ||
| IL_6YMI_007 | Stack and bulge | ||
| IL_6YMI_009 | Stack and bulge | ||
| IL_6YMI_011 | Stack and bulge |
Valid loops
No loops found
Problematic loops
No problematic loops
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