7S4U Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7S4U_002 | 1/B/54:57 | Mini UNCG | geometric HL_7Z4D_002 NA | |
| HL_7S4U_003 | 1/B/71:76 | GNRA | geometric HL_5F9F_003 HL_34789.2 | |
| HL_7S4U_004 | 1/B/86:90 | tRNA D-loop | geometric HL_6AEG_004 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7S4U_001 | GNRA |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7S4U_009 | 1/B/5:9, 1/C/30:34 | No text annotation | ||
| IL_7S4U_001 | 1/B/25:28, 1/B/39:44 | No text annotation | geometric IL_7QQP_001 IL_82683.3 | |
| IL_7S4U_002 | 1/B/53:54, 1/B/57:59 | Single bulged U | geometric IL_7Z4D_002 NA | |
| IL_7S4U_010 | 1/C/13:18, 1/D/40:44 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7S4U_003 | No text annotation | ||
| IL_7S4U_004 | No text annotation | ||
| IL_7S4U_005 | No text annotation | ||
| IL_7S4U_006 | No text annotation | ||
| IL_7S4U_007 | No text annotation | ||
| IL_7S4U_008 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Coloring options: