9E5O Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9E5O_001 | 1/A/26:34 | T-loop with 2 bulged bases not stacked | geometric HL_3F2X_001 HL_13999.3 | |
| HL_9E5O_002 | 1/A/42:47 | GNRA | geometric HL_6U8D_002 HL_34789.3 | |
| HL_9E5O_003 | 1/A/52:60 | T-loop with unstacked turn | geometric HL_6DN2_002 HL_27670.4 | |
| HL_9E5O_004 | 1/B/26:34 | T-loop with 2 bulged bases not stacked HL_13999.3 | ||
| HL_9E5O_005 | 1/B/42:47 | GNRA HL_34789.3 | ||
| HL_9E5O_006 | 1/B/52:60 | T-loop with unstacked turn HL_27670.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9E5O_001 | 1/A/4:13, 1/A/70:72 | No text annotation | geometric IL_4FRG_001 IL_01094.1 | |
| IL_9E5O_002 | 1/A/21:23, 1/A/37:38 | Single bulged U | geometric IL_4V9F_074 IL_97561.3 | |
| IL_9E5O_003 | 1/B/4:13, 1/B/70:72 | No text annotation IL_01094.1 | ||
| IL_9E5O_004 | 1/B/21:23, 1/B/37:38 | Single bulged U IL_97561.3 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_9E5O_001 | 1/A/16:21, 1/A/38:41, 1/A/48:51, 1/A/61:67 | No text annotation | ||
| J4_9E5O_002 | 1/B/16:21, 1/B/38:41, 1/B/48:51, 1/B/61:67 | No text annotation J4_24291.1 |
Problematic loops
No problematic loops
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