2DU4 Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2DU4_001 | 1/C/912:922 | No text annotation Not in a motif group | geometric HL_2DU3_001 HL_85680.1 | |
| HL_2DU4_002 | 1/C/930:938 | No text annotation Not in a motif group | geometric HL_2DU3_002 HL_50537.4 | |
| HL_2DU4_003 | 1/C/952:960 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_2DU3_003 HL_22280.1 | |
| HL_2DU4_004 | 1/C/912:922 | No text annotation Not in a motif group | geometric HL_2DU3_001 HL_85680.1 | |
| HL_2DU4_005 | 1/C/930:938 | No text annotation Not in a motif group | geometric HL_2DU3_002 HL_50537.4 | |
| HL_2DU4_006 | 1/C/952:960 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_2DU3_003 HL_22280.1 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2DU4_001 | Isolated cWS basepair |
Valid loops
No loops found
Problematic loops
No problematic loops
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