#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_2B3J_0012B3J0.30434Eanticodon stem-loop of t-RNA-Arg2 (nucleotides 27-42)A31C32G36A38U39cWW
2 HL_4V9F_0064V9F0.099030 LSU rRNAG164A165C168U170C171cWWtSH
3 HL_4WF9_0064WF90.06873X LSU rRNAG197A198C201U203C204cWWtSH
4 HL_5J7L_1395J7L0.00003DA LSU rRNAG194A195C198U200C201cWWntSH
5 HL_8VTW_0058VTW0.066431A LSU rRNAG194A195C198U200C201cWWtSH
6 HL_7A0S_0067A0S0.10163X LSU rRNAG171A172C175U177C178cWWntSH
7 HL_5TBW_0015TBW0.120831 LSU rRNAU38A39C42U44A45cWWntSH
8 HL_8C3A_0018C3A0.130931 LSU rRNAU37A38C41U43A44cWWntSH
9 HL_4V9F_0624V9F0.374540 LSU rRNAA2506G2507C2510A2513U2514cWWtSH
10 HL_4WF9_0564WF90.48004X LSU rRNAA2498G2499C2502A2505U2506cWWtSH
11 HL_7A0S_0597A0S0.50804X LSU rRNAA2450G2451C2454A2457U2458cWWtSH
12 HL_8VTW_0598VTW0.478241A LSU rRNAC2471G2472C2475A2478G2479cWWtSH
13 HL_5J7L_1935J7L0.46944DA LSU rRNAA2471G2472C2475A2478U2479cWWtSH
14 HL_5TBW_0615TBW0.503341 LSU rRNAC2840G2841C2844A2847G2848cWWtSH
15 HL_8C3A_0628C3A0.452541 LSU rRNAC2812G2813C2816A2819G2820cWWtSH

3D structures

Complete motif including flanking bases
SequenceCounts
GAAACAUC5
UAAGCAUA2
CGUUCAUAG2
ACUCGGAU1
AGCACAUAU1
AGUUCACAU1
AGUCCAUAU1
CGUCCACAG1
AGUUCAUAU1
Non-Watson-Crick part of the motif
SequenceCounts
AAACAU5
GUUCAUA3
AAGCAU2
CU(P5P)CGGA1
GCACAUA1
GUUCACA1
GUCCAUA1
GUCCACA1

Release history

Release3.88
Date2024-09-11
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (15)
  • Basepair signature
    cWW-tSH-F
    Heat map statistics
    Min 0.07 | Avg 0.31 | Max 0.54
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