Motif HL_36335.1 Version HL_36335.1 of this group appears in releases 3.89 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 3-7 | 4-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5W1H_001 | 5W1H | 0.0000 | 1 | B | C | -19 | A | -18 | A | -17 | G | -16 | A | -15 | A | -13 | G | -12 | A | -11 | G | -10 | cWW | csS | cSs |
| 2 | HL_5WLH_001 | 5WLH | 0.0448 | 1 | B | C | -19 | A | -18 | A | -17 | G | -16 | A | -15 | A | -13 | G | -12 | A | -11 | G | -10 | cWW | csS | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAGAAAGAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGAAAGA | 2 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-cSS-cSS-F
- Heat map statistics
- Min 0.04 | Avg 0.02 | Max 0.04
Coloring options: