Motif HL_38808.1 Version HL_38808.1 of this group appears in releases 3.89 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6ZDP_003 | 6ZDP | 0.9728 | 6 | B | Chains: B | C | 1303 | U | 1304 | U | 1311 | G | 1312 | ncWW | ncwW |
| 2 | HL_2DU3_002 | 2DU3 | 0.7523 | 5 | D | tRNA | A | 930 | C | 931 | A | 937 | U | 938 | cWW | ncWW |
| 3 | HL_4QEI_002 | 4QEI | 0.0000 | 5 | C | tRNA | A | 31 | U | 32 | U | 38 | U | 39 | cWW | cwW |
| 4 | HL_5E6M_002 | 5E6M | 0.1151 | 5 | C | tRNA | A | 31 | U | 32 | U | 38 | U | 39 | cWW | cwW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUUCCCAUU | 2 |
| CUAAUUAGUG | 1 |
| ACUGCAGAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCCCAU | 2 |
| UAAUUAGU | 1 |
| CUGCAGA | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: