Motif HL_60345.1 Version HL_60345.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DH3_003 | 3DH3 | 0.1172 | 1 | UNCG | F | C | 2594 | G | 2595 | G | 2597 | A | 2598 | G | 2599 | cWW | tSW |
| 2 | HL_3DH3_001 | 3DH3 | 0.1219 | 1 | UNCG | E | C | 2594 | G | 2595 | G | 2597 | A | 2598 | G | 2599 | cWW | tSW |
| 3 | HL_3DH3_004 | 3DH3 | 0.0000 | 1 | G | C | 2594 | G | 2595 | G | 2597 | A | 2598 | G | 2599 | cWW | tSW | |
| 4 | HL_1S72_025 | 1S72 | 0.1121 | 2 | 0 | U | 872 | G | 873 | A | 875 | A | 876 | G | 878 | cWW | tSW | |
| 5 | HL_3DH3_006 | 3DH3 | 0.7657 | 1 | H | C | 2594 | G | 2595 | G | 2597 | A | 2598 | G | 2599 | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUGAG | 4 |
| UGAAAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUGA | 4 |
| GAAAG | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_60345.1 | Only in the child motif |
|---|---|---|---|
| HL_25124.1 Compare | HL_3DH3_003, HL_3DH3_001 | HL_1S72_025, HL_3DH3_004, HL_3DH3_006 | HL_4A1B_069 |
| HL_62228.1 Compare | HL_1S72_025 | HL_3DH3_006, HL_3DH3_004, HL_3DH3_003, HL_3DH3_001 | HL_3V2F_024, HL_2QBG_025, HL_2ZJR_023 |
Coloring options: