Motif HL_70802.1 Version HL_70802.1 of this group appears in releases 3.89 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4M6D_004 | 4M6D | 0.0000 | 1 | UNCG related | H | aptamer | C | 32 | U | 33 | A | 35 | G | 36 | cWW | cWS |
| 2 | HL_3DD2_001 | 3DD2 | 0.9193 | 2 | B | RNA (26-MER) | CFL | 11 | UFT | 12 | A | 15 | G | 16 | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUAG | 1 |
| (CFL)(UFT)GAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUA | 1 |
| (UFT)GAA | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- UNCG related (1)
- Basepair signature
- cWW-cWS-F
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: