Motif HL_70802.1 Version HL_70802.1 of this group appears in releases 3.89 to 3.92
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DD2_001 | 3DD2 | 0.0000 | 1 | B | RNA (26-MER) | CFL | 11 | UFT | 12 | G | 13 | A | 15 | G | 16 | cWW | cWS | |
| 2 | HL_4M6D_004 | 4M6D | 0.9193 | 0 | D-loop related | H | aptamer | C | 32 | U | 33 | U | 34 | A | 35 | G | 36 | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| (CFL)(UFT)GAAG | 1 |
| CUUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| (UFT)GAA | 1 |
| UUA | 1 |
- Annotations
-
- (1)
- D-loop related (1)
- Basepair signature
- cWW-cWS-F
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: