#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 101-10
1 HL_5TBW_0275TBW0.68001 1 LSU rRNAC1239A1240U1241G1242G1243A1244G1246U1247C1248G1249cWW
2 HL_5J7L_1615J7L0.16131 DA LSU rRNAC1064U1065U1066A1067G1068A1069G1071C1072A1073G1074cWW
3 HL_5D8H_0015D8H0.07101 A LSU rRNAC1174U1175U1176A1177G1178A1179G1181C1182A1183G1184cWW
4 HL_1MMS_0011MMS0.00001 C23S RIBOSOMAL RNAC1064U1065U1066A1067G1068A1069G1071C1072A1073G1074cWW
5 HL_6PRV_0016PRV0.08351 A LSU rRNAC1064U1065U1066A1067G1068A1069G1071C1072A1073G1074cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUUAGAAGCAG4
CAUGGAAGUCG1
Non-Watson-Crick part of the motif
SequenceCounts
UUAGAAGCA4
AUGGAAGUC1

Release history

Release3.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cSW-R-R-tSH-R-R
Heat map statistics
Min 0.07 | Avg 0.28 | Max 0.71
Help

Coloring options:

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