#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 7break 8 9 10 11 12 131-132-123-114-55-106-97-8
1 IL_6N2V_0016N2V0.107518x6 Sarcin-Ricin with bulged A; G-bulgeAG7G8G9G11U12A13G14*C88G89A90G91A92C93cWWtSHtWHcSHntWHtHScWW
2 IL_4Y1M_0064Y1M0.000018x6 Sarcin-Ricin with bulged A; G-bulgeBG8G9G10G12U13A14G15*C96G97A98G99A100C101cWWtSHtWHcSHtWHtHScWW
3 IL_6CB3_0036CB30.143018x6 Sarcin-Ricin with bulged A; G-bulgeBG7G8G9G11U12A13G14*C91A92A93G94A95C96cWWtSHtWHcSHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGGAGUAG*CGAGAC2
GGGAGUAG*CAAGAC1
Non-Watson-Crick part of the motif
SequenceCounts
GGAGUA*GAGA2
GGAGUA*AAGA1

Release history

Release3.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.99
Date2019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-062024-12-042025-01-012025-01-292025-02-262025-03-262025-04-232025-05-212025-06-182025-07-16
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • 8x6 Sarcin-Ricin with bulged A; G-bulge (3)
  • Basepair signature
    cWW-tSH-tWH-cSH-tWH-tHS-cWW
    Heat map statistics
    Min 0.11 | Avg 0.09 | Max 0.17
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