#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12 131-132-123-104-65-118-9
1 IL_4V9F_0914V9F0.357910 LSU rRNAG2809G2810A2811A2812A2813A2814A2816G2817*C2672U2673G2674A2675C2676cWWtSHtHWtHScWW
2 IL_5J7L_3455J7L0.10041tSH-tHS-tHW (H)DA LSU rRNAC2774G2775A2776G2777A2778U2779A2781G2782*C2636U2637G2638A2639G2640cWWtSHtHWcSHtHScWW
3 IL_8VTW_1018VTW0.00001tSH-tHS-tHW (H)1A LSU rRNAC2774A2775A2776G2777A2778U2779A2781G2782*U2636U2637G2638A2639G2640cWWtSHtHWncSHtHScWW
4 IL_7A0S_0937A0S0.07951tSH-tHS-tHWX LSU rRNAC2754A2755A2756G2757A2758U2759A2761G2762*U2615U2616G2617A2618G2619cWWtSHtHWncSHtHScWW
5 IL_4WF9_0994WF90.08211tSH-tHS-tHWX LSU rRNAC2801A2802A2803G2804A2805U2806A2808G2809*U2663U2664G2665A2666G2667cWWtSHtHWncSHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CAAGAUGAG*UUGAG3
GGAAAAGAG*CUGAC1
CGAGAUGAG*CUGAG1
Non-Watson-Crick part of the motif
SequenceCounts
AAGAUGA*UGA3
GAAAAGA*UGA1
GAGAUGA*UGA1

Release history

Release3.873.883.893.90
Date2024-08-142024-09-112024-10-092024-11-06
StatusUpdated, 1 parentExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tSH-tHS-tHW (2)
  • tSH-tHS-tHW (H) (2)
  • (1)
  • Basepair signature
    cWW-tSH-tHW-tHS-cSH-cWW-L
    Heat map statistics
    Min 0.08 | Avg 0.16 | Max 0.38
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