1 IL_2QBG_092 2QBG 0.6432 0 B LSU rRNA U 2493 G 2494 * U 2457 G 2458 A 2459 cWW cWW
2 IL_4A1B_111 4A1B 0.6459 0 1 LSU rRNA C 2864 G 2865 * U 2937 G 2938 G 2939 cWW cWW
3 IL_4IOA_090 4IOA 0.6412 0 Major groove platform (H) X LSU rRNA C 2486 G 2487 * U 2559 G 2560 G 2561 cWW cWW chH
4 IL_2QBG_095 2QBG 0.6528 0 B LSU rRNA C 2507 G 2508 * U 2580 G 2581 G 2582 cWW cWW chH
5 IL_2QBG_001 2QBG 0.5404 0 A 5S rRNA C 17 G 18 * U 65 A 66 G 67 cWW cWW
6 IL_4A1B_087 4A1B 0.5878 1 1 LSU rRNA U 2195 G 2196 * U 2236 A 2237 A 2239 cWW cWW
7 IL_3V2F_097 3V2F 0.5967 0 A LSU rRNA C 2591 G 2592 * C 2601 A 2602 G 2603 cWW cWW
8 IL_1FJG_028 1FJG 0.2870 0 Major groove platform (H) A SSU rRNA G 657 G 658 * C 747 C 748 C 749 cWW cWW ncSH
9 IL_1G1X_002 1G1X 0.2575 0 Major groove platform D+E 16S RIBOSOMAL RNA G 657 G 658 * C 747 C 748 C 749 cWW cWW ncSH
10 IL_2XZM_079 2XZM 0.3375 0 A SSU rRNA U 1469 C 1470 * G 1479 U 1480 A 1481 cWW cWW ncSH
11 IL_3NKB_002 3NKB 0.2435 0 Major groove platform B Hepatitis delta virus ribozyme U 47 C 48 * G 55 U 56 A 57 cWW cWW cSH
12 IL_2XZM_055 2XZM 0.2999 0 A SSU rRNA U 1100 C 1101 * G 1091 U 1092 A 1093 cWW cWW ncSH
13 IL_3Q1Q_001 3Q1Q 0.4544 0 B RNase P class A G 328 C 329 * G 51 U 52 C 53 cWW cWW ncSH
14 IL_3SUX_002 3SUX 0.5240 0 Major groove platform X THF riboswitch G 37 A 38 * U 47 G 48 U 49 cWW ncWW
15 IL_4A1B_106 4A1B 0.3020 0 1 LSU rRNA G 2811 G 2812 * U 2853 C 2854 C 2855 cWW cWW ncSH
16 IL_3U5H_108 3U5H 0.3158 0 5 LSU rRNA G 2823 G 2824 * U 2865 U 2866 C 2867 cWW cWW ncSH cSH
17 IL_3V2F_087 3V2F 0.2863 0 A LSU rRNA G 2414 G 2415 * U 2401 C 2402 C 2403 cWW cWW ncSH
18 IL_1XJR_002 1XJR 0.2533 0 Major groove platform A s2m RNA G 13 G 14 * U 37 A 38 C 39 cWW cWW cSH
19 IL_4IOA_084 4IOA 0.2331 0 Major groove platform X LSU rRNA G 2393 G 2394 * U 2380 A 2381 C 2382 cWW cWW
20 IL_3V2F_009 3V2F 0.2624 0 A LSU rRNA G 272|||D G 272|||E * U 363|||E A 363|||F C 364 cWW cWW ncSH
21 IL_2AW7_031 2AW7 0.2849 0 A SSU rRNA U 644 G 645 * U 594 A 595 A 596 cWW cWW ncSH
22 IL_1I6U_003 1I6U 0.2975 0 D 16S RRNA FRAGMENT U 28 G 29 * U 9 A 10 A 11 ntHS cWW cWW cSH
23 IL_4A1B_021 4A1B 0.3768 0 1 LSU rRNA U 473 G 474 * U 503 A 504 A 505 cWW ncWW ncSH
24 IL_3V2F_090 3V2F 0.3046 0 A LSU rRNA U 2493 G 2494 * U 2457 G 2458 A 2459 ntHS cWW ncWW
25 IL_4IOA_087 4IOA 0.3021 0 X LSU rRNA U 2472 G 2473 * U 2436 G 2437 A 2438 ntHS cWW cWW
26 IL_2QBG_078 2QBG 0.2574 0 B LSU rRNA U 2617 G 2618 * C 2050 A 2051 A 2052 tHS cWW cWW cSH
27 IL_3V2F_075 3V2F 0.2967 0 A LSU rRNA C 2617 G 2618 * C 2050 A 2051 G 2052 cWW cWW cSH
28 IL_4IOA_073 4IOA 0.3010 0 Major groove platform (H) X LSU rRNA C 2596 G 2597 * C 2033 A 2034 G 2035 cWW cWW cSH
29 IL_1S03_008 1S03 0.1751 0 Major groove platform B 47-MER U 16 G 17 * C 34 A 35 A 36 tHS cWW cWW cSH
30 IL_4IOA_086 4IOA 0.0000 0 Major groove platform (H) X LSU rRNA G 2433 G 2434 * C 2475 A 2476 C 2477 cWW cWW ncSH
31 IL_1S72_080 1S72 0.1111 0 Major groove platform (H) 0 LSU rRNA G 2489 A 2490 * U 2531 A 2532 C 2533 cWW cWW cSH
32 IL_3V2F_089 3V2F 0.0875 0 A LSU rRNA G 2454 G 2455 * C 2496 A 2497 C 2498 cWW cWW cSH
33 IL_2QBG_091 2QBG 0.1270 0 B LSU rRNA G 2454 G 2455 * C 2496 A 2497 C 2498 cWW cWW cSH
34 IL_3D0U_004 3D0U 0.1775 1 Major groove platform; stack outside cWW A Lysine riboswitch G 51 G 52 * C 35 A 36 C 38 cWW cWW cSH
35 IL_3OWZ_003 3OWZ 0.2095 0 A Glycine riboswitch G 35 G 36 * C 68 U 69 C 70 cWW cWW cSH
36 IL_3OWZ_007 3OWZ 0.2005 0 B Glycine riboswitch G 35 G 36 * C 68 U 69 C 70 cWW cWW cSH
37 IL_2QBG_025 2QBG 0.3166 0 B LSU rRNA G 757 C 758 * G 738 A 739 C 740 cWW cWW cSH
38 IL_3P49_010 3P49 0.3750 0 A Glycine riboswitch G 113 G 114 * C 140 U 141 C 142 cWW cWW ncSH
39 IL_4A1B_108 4A1B 0.4931 0 1 LSU rRNA U 2850 G 2851 * U 2814 U 2815 G 2816 cWW cWW
40 IL_3P49_007 3P49 0.4181 0 A Glycine riboswitch G 38 A 39 * U 49 U 50 C 51 ncWW cWW ncSH
41 IL_2QBG_044 2QBG 0.3317 1 B LSU rRNA U 1101 C 1102 * G 1087 A 1089 A 1090 cWW cWW ncSH
42 IL_3DIR_004 3DIR 0.2934 1 A Lysine riboswitch G 54 G 55 * C 38 A 39 C 41 cWW cWW
43 IL_1QA6_002 1QA6 0.3499 1 C LSU rRNA U 151 C 152 * G 137 A 139 A 140 ntHS cWW cWW cSH
44 IL_1FJG_024 1FJG 0.2619 0 Major groove platform (H) A SSU rRNA G 644 C 645 * G 594 G 595 C 596 ntHS cWW cWW ncSH
45 IL_1S72_061 1S72 0.4088 1 0 LSU rRNA U 2034 C 2035 * G 1744 G 1745 A 1747 tHS cWW cWW
46 IL_2QBG_064 2QBG 0.4516 1 B LSU rRNA U 1993 C 1994 * G 1666 G 1667 A 1669 tHS cWW cWW
47 IL_3V2F_063 3V2F 0.4474 1 A LSU rRNA U 1993 C 1994 * G 1666 G 1667 A 1669 tHS cWW cWW
48 IL_3U5H_084 3U5H 0.4448 1 5 LSU rRNA U 2336 C 2337 * G 1898 G 1899 A 1901 tHS cWW cWW
49 IL_4A1B_080 4A1B 0.4622 1 1 LSU rRNA U 2331 C 2332 * G 1922 G 1923 A 1925 tHS cWW cWW
50 IL_1G1X_001 1G1X 0.3918 1 Major groove platform; stack outside cWW D+E 16S RIBOSOMAL RNA G 654 A 655 * U 751 G 752 C 754 tHS cWW cWW ncSH
51 IL_2AW7_034 2AW7 0.3829 1 A SSU rRNA G 654 A 655 * U 751 G 752 C 754 tHS cWW cWW
52 IL_1FJG_027 1FJG 0.3750 1 Major groove platform; stack outside cWW (H) A SSU rRNA G 654 A 655 * U 751 G 752 C 754 tHS cWW cWW ncSH
53 IL_1F7Y_001 1F7Y 0.3923 1 B 16S RIBOSOMAL RNA FRAGMENT G 18 A 19 * U 50 G 51 C 53 tHS cWW cWW ncSH
54 IL_2QBG_049 2QBG 0.4847 1 B LSU rRNA A 1603 C 1604 * G 1310 G 1311 U 1313 ntHS cWW cWW
