1 | IL_2QBG_095 | 2QBG | 0.6624 | 0 | | B | 23S rRNA | C | 2507 | G | 2508 | * | U | 2580 | G | 2581 | G | 2582 | | cWW | cWW | | chH |
2 | IL_4IOA_090 | 4IOA | 0.6450 | 0 | Major groove platform (H) | X | LSU rRNA | C | 2486 | G | 2487 | * | U | 2559 | G | 2560 | G | 2561 | | cWW | cWW | | chH |
3 | IL_4A1B_111 | 4A1B | 0.6519 | 0 | | 1 | 26S RRNA | C | 2864 | G | 2865 | * | U | 2937 | G | 2938 | G | 2939 | | cWW | cWW | | |
4 | IL_2QBG_092 | 2QBG | 0.6529 | 0 | | B | 23S rRNA | U | 2493 | G | 2494 | * | U | 2457 | G | 2458 | A | 2459 | | cWW | cWW | | |
5 | IL_4A1B_108 | 4A1B | 0.4258 | 0 | | 1 | 26S RRNA | U | 2850 | G | 2851 | * | U | 2814 | U | 2815 | G | 2816 | | cWW | cWW | | |
6 | IL_3P49_007 | 3P49 | 0.4239 | 0 | | A | Glycine riboswitch | G | 38 | A | 39 | * | U | 49 | U | 50 | C | 51 | | ncWW | cWW | | ncSH |
7 | IL_3P49_010 | 3P49 | 0.3451 | 0 | | A | Glycine riboswitch | G | 113 | G | 114 | * | C | 140 | U | 141 | C | 142 | | cWW | cWW | | ncSH |
8 | IL_2QBG_025 | 2QBG | 0.3024 | 0 | | B | 23S rRNA | G | 757 | C | 758 | * | G | 738 | A | 739 | C | 740 | | cWW | cWW | | cSH |
9 | IL_3OWZ_003 | 3OWZ | 0.2114 | 0 | | A | Domain II of glycine riboswitch | G | 35 | G | 36 | * | C | 68 | U | 69 | C | 70 | | cWW | cWW | | cSH |
10 | IL_3OWZ_007 | 3OWZ | 0.2132 | 0 | | B | Domain II of glycine riboswitch | G | 35 | G | 36 | * | C | 68 | U | 69 | C | 70 | | cWW | cWW | | cSH |
11 | IL_3D0U_004 | 3D0U | 0.1890 | 1 | Major groove platform; stack outside cWW | A | Lysine Riboswitch RNA | G | 51 | G | 52 | * | C | 35 | A | 36 | C | 38 | | cWW | cWW | | cSH |
12 | IL_2QBG_091 | 2QBG | 0.1341 | 0 | | B | 23S rRNA | G | 2454 | G | 2455 | * | C | 2496 | A | 2497 | C | 2498 | | cWW | cWW | | cSH |
13 | IL_1S72_080 | 1S72 | 0.1227 | 0 | Major groove platform (H) | 0 | LSU rRNA | G | 2489 | A | 2490 | * | U | 2531 | A | 2532 | C | 2533 | | cWW | cWW | | cSH |
14 | IL_4IOA_086 | 4IOA | 0.1016 | 0 | Major groove platform (H) | X | LSU rRNA | G | 2433 | G | 2434 | * | C | 2475 | A | 2476 | C | 2477 | | cWW | cWW | | ncSH |
15 | IL_4NVV_088 | 4NVV | 0.0000 | 0 | | A | 23S Ribosomal RNA | G | 2466 | G | 2467 | * | C | 2508 | A | 2509 | C | 2510 | | cWW | cWW | | cSH |
16 | IL_1S03_008 | 1S03 | 0.1364 | 0 | Major groove platform | B | 47-MER | U | 16 | G | 17 | * | C | 34 | A | 35 | A | 36 | tHS | cWW | cWW | | cSH |
17 | IL_1VW3_074 | 1VW3 | 0.1480 | 0 | | A | 21S ribosomal RNA | G | 2720 | G | 2721 | * | C | 2762 | A | 2763 | C | 2764 | | cWW | cWW | | cSH |
18 | IL_4IOA_073 | 4IOA | 0.2491 | 0 | Major groove platform (H) | X | LSU rRNA | C | 2596 | G | 2597 | * | C | 2033 | A | 2034 | G | 2035 | | cWW | cWW | | cSH |
19 | IL_4NVV_078 | 4NVV | 0.2648 | 0 | | A | 23S Ribosomal RNA | C | 2629 | G | 2630 | * | C | 2072 | A | 2073 | G | 2074 | | cWW | cWW | | cSH |
20 | IL_2QBG_078 | 2QBG | 0.2100 | 0 | | B | 23S rRNA | U | 2617 | G | 2618 | * | C | 2050 | A | 2051 | A | 2052 | tHS | cWW | cWW | | cSH |
21 | IL_1VW3_062 | 1VW3 | 0.2185 | 0 | | A | 21S ribosomal RNA | U | 2884 | G | 2885 | * | C | 1950 | A | 1951 | A | 1952 | tHS | cWW | cWW | | cSH |
22 | IL_4IOA_087 | 4IOA | 0.2679 | 0 | | X | LSU rRNA | U | 2472 | G | 2473 | * | U | 2436 | G | 2437 | A | 2438 | ntHS | cWW | cWW | | |
23 | IL_1VW3_075 | 1VW3 | 0.2881 | 0 | | A | 21S ribosomal RNA | U | 2759 | G | 2760 | * | U | 2723 | A | 2724 | A | 2725 | tHS | cWW | cWW | | cSH |
24 | IL_2AW7_031 | 2AW7 | 0.2446 | 0 | | A | 16S ribosomal RNA | U | 644 | G | 645 | * | U | 594 | A | 595 | A | 596 | | cWW | cWW | | ncSH |
25 | IL_1I6U_003 | 1I6U | 0.2504 | 0 | | D | 16S RRNA FRAGMENT | U | 28 | G | 29 | * | U | 9 | A | 10 | A | 11 | ntHS | cWW | cWW | | cSH |
26 | IL_4A1B_021 | 4A1B | 0.3230 | 0 | | 1 | 26S RRNA | U | 473 | G | 474 | * | U | 503 | A | 504 | A | 505 | | cWW | ncWW | | ncSH |
27 | IL_4A1B_106 | 4A1B | 0.2744 | 0 | | 1 | 26S RRNA | G | 2811 | G | 2812 | * | U | 2853 | C | 2854 | C | 2855 | | cWW | cWW | | ncSH |
28 | IL_3U5H_108 | 3U5H | 0.2887 | 0 | | 5 | 25S rRNA | G | 2823 | G | 2824 | * | U | 2865 | U | 2866 | C | 2867 | | cWW | cWW | ncSH | cSH |
29 | IL_4IOA_084 | 4IOA | 0.2207 | 0 | Major groove platform | X | LSU rRNA | G | 2393 | G | 2394 | * | U | 2380 | A | 2381 | C | 2382 | | cWW | cWW | | |
30 | IL_1XJR_002 | 1XJR | 0.2371 | 0 | Major groove platform | A | s2m RNA | G | 13 | G | 14 | * | U | 37 | A | 38 | C | 39 | | cWW | cWW | | cSH |
31 | IL_4NVV_008 | 4NVV | 0.2335 | 0 | | A | 23S Ribosomal RNA | G | 291 | G | 292 | * | U | 392 | A | 393 | C | 394 | | cWW | cWW | | |
32 | IL_4NVV_086 | 4NVV | 0.2465 | 0 | | A | 23S Ribosomal RNA | G | 2426 | G | 2427 | * | U | 2413 | C | 2414 | C | 2415 | | cWW | cWW | | ncSH |
33 | IL_1G1X_002 | 1G1X | 0.2888 | 0 | Major groove platform | D+E | 16S RIBOSOMAL RNA | G | 657 | G | 658 | * | C | 747 | C | 748 | C | 749 | | cWW | cWW | | ncSH |
34 | IL_1VW3_073 | 1VW3 | 0.3459 | 0 | | A | 21S ribosomal RNA | G | 2681 | G | 2682 | * | C | 2668 | A | 2669 | C | 2670 | | cWW | cWW | | |
35 | IL_4BPP_077 | 4BPP | 0.3305 | 0 | | A | 18S RRNA | U | 1469 | C | 1470 | * | G | 1479 | U | 1480 | A | 1481 | | cWW | cWW | | ncSH |
36 | IL_3NKB_002 | 3NKB | 0.2955 | 0 | Major groove platform | B | The hepatitis delta virus ribozyme | U | 47 | C | 48 | * | G | 55 | U | 56 | A | 57 | | cWW | cWW | | cSH |
37 | IL_1FJG_028 | 1FJG | 0.3123 | 0 | Major groove platform (H) | A | SSU rRNA | G | 657 | G | 658 | * | C | 747 | C | 748 | C | 749 | | cWW | cWW | | ncSH |
38 | IL_2QBG_044 | 2QBG | 0.3740 | 1 | | B | 23S rRNA | U | 1101 | C | 1102 | * | G | 1087 | A | 1089 | A | 1090 | | cWW | cWW | | ncSH |
39 | IL_3DIR_004 | 3DIR | 0.3443 | 1 | | A | RNA (174-MER) | G | 54 | G | 55 | * | C | 38 | A | 39 | C | 41 | | cWW | cWW | | |
40 | IL_1QA6_002 | 1QA6 | 0.3981 | 1 | | C | 58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN | U | 151 | C | 152 | * | G | 137 | A | 139 | A | 140 | ntHS | cWW | cWW | | cSH |
41 | IL_1FJG_024 | 1FJG | 0.3100 | 0 | Major groove platform (H) | A | SSU rRNA | G | 644 | C | 645 | * | G | 594 | G | 595 | C | 596 | ntHS | cWW | cWW | | ncSH |
42 | IL_1S72_061 | 1S72 | 0.4290 | 1 | | 0 | LSU rRNA | U | 2034 | C | 2035 | * | G | 1744 | G | 1745 | A | 1747 | tHS | cWW | cWW | | |
43 | IL_1VW3_048 | 1VW3 | 0.4521 | 1 | | A | 21S ribosomal RNA | U | 1893 | C | 1894 | * | G | 1618 | G | 1619 | A | 1621 | tHS | cWW | cWW | | |
44 | IL_3U5H_084 | 3U5H | 0.4634 | 1 | | 5 | 25S rRNA | U | 2336 | C | 2337 | * | G | 1898 | G | 1899 | A | 1901 | tHS | cWW | cWW | | |
45 | IL_2QBG_064 | 2QBG | 0.4683 | 1 | | B | 23S rRNA | U | 1993 | C | 1994 | * | G | 1666 | G | 1667 | A | 1669 | tHS | cWW | cWW | | |
46 | IL_4NVV_066 | 4NVV | 0.4205 | 1 | | A | 23S Ribosomal RNA | U | 2015 | C | 2016 | * | G | 1713 | G | 1714 | A | 1716 | tHS | cWW | cWW | | |
47 | IL_4A1B_080 | 4A1B | 0.4757 | 1 | | 1 | 26S RRNA | U | 2331 | C | 2332 | * | G | 1922 | G | 1923 | A | 1925 | tHS | cWW | cWW | | |
48 | IL_1G1X_001 | 1G1X | 0.4038 | 1 | Major groove platform; stack outside cWW | D+E | 16S RIBOSOMAL RNA | G | 654 | A | 655 | * | U | 751 | G | 752 | C | 754 | tHS | cWW | cWW | | ncSH |
49 | IL_2AW7_034 | 2AW7 | 0.3913 | 1 | | A | 16S ribosomal RNA | G | 654 | A | 655 | * | U | 751 | G | 752 | C | 754 | tHS | cWW | cWW | | |
50 | IL_1FJG_027 | 1FJG | 0.3906 | 1 | Major groove platform; stack outside cWW (H) | A | SSU rRNA | G | 654 | A | 655 | * | U | 751 | G | 752 | C | 754 | tHS | cWW | cWW | | ncSH |
51 | IL_1F7Y_001 | 1F7Y | 0.4053 | 1 | | B | 16S RIBOSOMAL RNA FRAGMENT | G | 18 | A | 19 | * | U | 50 | G | 51 | C | 53 | tHS | cWW | cWW | | ncSH |
52 | IL_2QBG_049 | 2QBG | 0.4980 | 1 | | B | 23S rRNA | A | 1603 | C | 1604 | * | G | 1310 | G | 1311 | U | 1313 | ntHS | cWW | cWW | | |
53 | IL_3Q1Q_001 | 3Q1Q | 0.5115 | 0 | | B | RNase P RNA | G | 328 | C | 329 | * | G | 51 | U | 52 | C | 53 | | cWW | cWW | | ncSH |
54 | IL_3SUX_002 | 3SUX | 0.5321 | 0 | Major groove platform | X | THF riboswitch | G | 37 | A | 38 | * | U | 47 | G | 48 | U | 49 | | cWW | ncWW | | |
55 | IL_4A1B_087 | 4A1B | 0.5722 | 1 | | 1 | 26S RRNA | U | 2195 | G | 2196 | * | U | 2236 | A | 2237 | A | 2239 | | cWW | cWW | | |
56 | IL_2QBG_001 | 2QBG | 0.5016 | 0 | | A | 5S rRNA | C | 17 | G | 18 | * | U | 65 | A | 66 | G | 67 | | cWW | cWW | | |