#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 91-95-86-7
1 IL_2QBG_0622QBG0.10220B23S rRNAG1651A1652G1653A1654A1655C1656*G2004A2005C2006cWWtHScWW
2 IL_4IOA_0624IOA0.00000X LSU rRNAG1668A1669G1670A1671A1672C1673*G1987A1988C1989cWWtHScWW
3 IL_3V2F_0613V2F0.06950A23S Ribosomal RNAG1651A1652G1653A1654A1655C1656*G2004A2005C2006cWWtHScWW
4 IL_1S72_0591S720.239910 LSU rRNAG1728A1729C1731A1732A1733C1734*G2045G2046C2047cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAC*GAC3
GAGCAAC*GGC1
Non-Watson-Crick part of the motif
SequenceCounts
AGAA*A3
AGCAA*G1

Release history

Release1.51.61.71.81.91.101.111.121.13
Date2013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_45262.4Only in the parent motif
IL_45262.3
Compare
IL_3V2F_061, IL_2QBG_062, IL_4IOA_062, IL_1S72_059IL_2XZM_048

Children motifs

Child motifCommon motif instancesOnly in IL_45262.4Only in the child motif
IL_59864.1
Compare
IL_2QBG_062, IL_4IOA_062, IL_1S72_059IL_3V2F_061IL_4NVV_064, IL_1VW3_046
Annotations
  • (4)
  • Basepair signature
    cWW-L-L-L-tHS-cWW
    Heat map statistics
    Min 0.07 | Avg 0.13 | Max 0.27
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