#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 101-102-96-7
1 IL_1NUJ_0031NUJ0.00000E+FRNA (13-mer) + RNA (11-mer)C22C23G24A25G26C27*G43G44A45G46cWWncWWcWW
2 IL_1NUJ_0021NUJ0.01420C+DRNA (13-mer) + RNA (11-mer)C22C23G24A25G26C27*G43G44A45G46cWWncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCGAGC*GGAG2
Non-Watson-Crick part of the motif
SequenceCounts
CGAG*GA2

Release history

Release0.30.4
Date2011-12-082011-12-08
StatusNew id, 1 parentExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_77567.1Only in the parent motif
IL_36381.2
Compare
IL_1NUJ_002, IL_1NUJ_003IL_1NUJ_004, IL_3MEI_004, IL_1NUJ_001, IL_1S72_053

Children motifs

Child motifCommon motif instancesOnly in IL_77567.1Only in the child motif
IL_68211.1
Compare
IL_1NUJ_002, IL_1NUJ_003IL_3LOA_001, IL_429D_001, IL_429D_002, IL_1NUJ_001, IL_2XZM_041, IL_1NUJ_004
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.01 | Avg 0.01 | Max 0.01
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