#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-114-95-86-7
1 IL_1S72_0571S720.000010 LSU rRNAC1578C1579A1580A1581C1582U1583*A1612C1613G1614A1615A1616G1618cWWntWHtHSncBWcWW
2 IL_3P49_0123P490.29771AGlycine riboswitchG116C117A118A119A120G121*C132C133U134A135A136C138cWWtWHncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCAACU*ACGAACG1
GCAAAG*CCUAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
CAAC*CGAAC1
CAAA*CUAAA1

Release history

Release1.141.15
Date2014-04-272014-06-20
StatusUpdated, 1 parentExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_80494.3Only in the parent motif
IL_80494.2
Compare
IL_3P49_012, IL_1S72_057IL_3B5F_001

Children motifs

Child motifCommon motif instancesOnly in IL_80494.3Only in the child motif
IL_80494.4
Compare
IL_3P49_012, IL_1S72_057IL_1VWW_068
Annotations
  • (2)
  • Basepair signature
    cWW-tWH-L-R-tHS-bif-cWW
    Heat map statistics
    Min 0.30 | Avg 0.15 | Max 0.30
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