Motif IL_83856.1 Version IL_83856.1 of this group appears in releases 0.9 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_038 | 3U5F | 0 | 0 | 6 | 18S rRNA | G | 703 | C | 704 | U | 705 | A | 706 | A | 707 | C | 708 | * | G | 730 | C | 731 | G | 732 | A | 733 | A | 734 | C | 735 | cWW | ncWW | ntHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCUAAC*GCGAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUAA*CGAA | 1 |
Release history
| Release | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_83856.1 | Only in the parent motif |
|---|---|---|---|
| IL_92459.1 Compare | IL_3U5F_038 | IL_2ZJR_017 |
Children motifs
| Child motif | Common motif instances | Only in IL_83856.1 | Only in the child motif |
|---|---|---|---|
| IL_37171.1 Compare | IL_3U5F_038 | IL_4NVV_033, IL_3B5F_001 |
- Annotations
- Basepair signature
- cWW-cWW-tWW-tHS-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: