#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2break 3 41-42-3
1 IL_2OZB_0012OZB0.35651Single bulged ACU24G26*C47G48cWWcWW
2 IL_3F1H_0593F1H0.22881AU1489G1491*C1499G1500cWWcWW
3 IL_2IPY_0042IPY0.19921DU5G7*C25G26cWWcWW
4 IL_2IPY_0012IPY0.21141CU5G7*C25G26cWWcWW
5 IL_2NZ4_0042NZ40.00001Single bulged AF+QC5G7*C52G53cWWcWW
6 IL_2ZJR_0242ZJR0.74911XG938G940*C863C864cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAG*CG2
UUG*CG2
CAG*CG1
GCG*CC1
Non-Watson-Crick part of the motif
SequenceCounts
A*3
U*2
C*1

Release history

Release0.1
Date2011-12-08
StatusNew id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_86322.1Only in the child motif
IL_63653.1
Compare
IL_2NZ4_004, IL_2IPY_001, IL_2IPY_004, IL_2ZJR_024, IL_2OZB_001, IL_3F1H_059IL_2PN4_008, IL_1ET4_008, IL_2ZJR_011, IL_2PN4_003, IL_2ZJR_016, IL_2ZJR_015, IL_2C50_002, IL_1GID_005, IL_2C50_001, IL_3D2V_004, IL_3D2V_001, IL_1S72_042, IL_1S72_040, IL_3F1H_077, IL_3F1H_073, IL_2ZJR_065, IL_2IPY_002, IL_2IPY_003, IL_2IPY_006, IL_1CSL_002, IL_2ZJR_002, IL_3F1H_098, IL_1GID_009, IL_3B31_001, IL_1ET4_002, IL_1GID_002, IL_1S72_014, IL_3F1H_066, IL_2ZJR_093, IL_2ZJR_091, IL_2ZJR_098, IL_1S72_086, IL_2NOK_006, IL_3F1H_087, IL_1I9X_001, IL_2NOK_003, IL_1I9X_002, IL_2ZJR_034, IL_1DUQ_006, IL_2ZJR_031, IL_1FJG_040, IL_1FJG_043, IL_1S72_064, IL_1S72_067, IL_2PLY_002, IL_1S72_104, IL_3F1H_018, IL_1U9S_006, IL_6MSF_001, IL_1U9S_003, IL_1U9S_001, IL_2OIU_003, IL_2OIU_001, IL_2C4Z_002, IL_2C4Z_001, IL_2PJP_001, IL_1S72_074, IL_1S72_070, IL_3F1H_002, IL_3OWZ_005, IL_3OWZ_001, IL_1S72_002, IL_2BQ5_002, IL_2ZJR_056, IL_2BQ5_001, IL_2BU1_002, IL_2BU1_001, IL_1DUQ_002, IL_1MJI_001, IL_1DUQ_004, IL_1MJI_003, IL_3G78_004, IL_1DUQ_008, IL_1S72_088, IL_3F1H_032, IL_3F1H_034, IL_3F1H_037, IL_2GIS_001, IL_3D0U_005, IL_3D0U_001, IL_2IZN_002, IL_2IZN_001, IL_2IZM_001, IL_2IZM_002, IL_1KXK_003, IL_1S72_030, IL_1FJG_016, IL_1S72_093, IL_3G78_015, IL_1S72_096, IL_3DIR_001, IL_3DIR_005, IL_1S03_002, IL_1S03_001, IL_1S03_006, IL_1S03_005, IL_1S72_010, IL_3MUR_003, IL_1R3E_001, IL_3MUR_004, IL_1R3E_002, IL_3F1H_103, IL_2IZ9_001, IL_2IZ9_002, IL_2ZY6_002, IL_1ET4_004, IL_2NZ4_007, IL_1FJG_005, IL_1FJG_007, IL_1FJG_001, IL_1FJG_002, IL_397D_001, IL_1S72_077, IL_3MEI_001, IL_2VPL_005, IL_1S72_027, IL_1S72_026, IL_2VPL_002, IL_1F7Y_002, IL_1GID_012, IL_1DQH_001, IL_1FJG_035, IL_1FJG_036, IL_2QUX_004, IL_2QUX_005, IL_2QUX_006, IL_1JZV_002, IL_1JZV_005, IL_2QUX_001, IL_2QUX_002, IL_2QUX_003, IL_2IPY_005, IL_1FUF_002, IL_1FUF_003, IL_2PLY_001, IL_3F1H_019, IL_1FJG_014, IL_3F1H_046, IL_2ZJR_072, IL_3HHN_003, IL_3HHN_001, IL_2ZJR_076
Annotations
  • (4)
  • Single bulged A (2)
  • Basepair signature
    Heat map statistics
    Min 0.15 | Avg 0.35 | Max 0.88
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