#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 10break 11 12 13 141-142-133-124-74-95-69-1210-11
1 J3_5J7L_0045J7L0.22242AA SSU rRNAC857G858G859A860G861*C868G869U870A872G874*C826U827U828G829cWWtSHtHSntWHcWWtWWcWW
2 J3_4LFB_0014LFB0.10942A SSU rRNAC857G858A859A860G861*C868G869U870A872G874*C826U827A828G829cWWtSHcWStHSntWHcWWtWWcWW
3 J3_6CZR_0186CZR0.000021a SSU rRNAC835G836A837A838G839*C846G847U848A850G852*C810U811A812G813cWWtSHncWSntHScWWntWWcWW
4 J3_4WF9_0054WF90.36762X LSU rRNAC1342U1343A1344A1345G1346*C1649G1650C1651A1652C1655*G1664U1665A1666G1667cWWtHSntWWcWWtHWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAG*CGAAG*CGUUAAG2
CUUG*CGGAG*CGUUAAG1
CUAAG*CGCAAAC*GUAG1
Non-Watson-Crick part of the motif
SequenceCounts
UA*GAA*GUUAA2
UU*GGA*GUUAA1
UAA*GCAAA*UA1

Release history

Release3.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.88
Date2019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-tSH-F-tWW-tHS-cWW-cWW-F
    Heat map statistics
    Min 0.11 | Avg 0.32 | Max 0.85
    Help

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