Motif J3_91491.1 Version J3_91491.1 of this group appears in releases 3.2 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | break | 9 | 10 | 11 | 1-3 | 1-11 | 3-7 | 3-10 | 5-6 | 8-9 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_5J7L_045 | 5J7L | 0.2022 | 1 | DA | LSU rRNA | C | 2332 | A | 2333 | A | 2335 | A | 2336 | G | 2337 | * | C | 2295 | U | 2296 | A | 2297 | * | U | 2321 | A | 2322 | G | 2323 | cWW | tHW | tWW | cWW | cWW | |
| 2 | J3_4WF9_008 | 4WF9 | 0.0000 | 1 | X | LSU rRNA | C | 2359 | A | 2360 | A | 2362 | A | 2363 | G | 2364 | * | C | 2322 | U | 2323 | C | 2324 | * | G | 2348 | A | 2349 | G | 2350 | cWW | tHW | tWW | cWW | cWW | |
| 3 | J3_4V9F_008 | 4V9F | 0.1260 | 1 | 0 | LSU rRNA | C | 2366 | A | 2367 | A | 2369 | A | 2370 | G | 2371 | * | C | 2329 | U | 2330 | C | 2331 | * | G | 2355 | A | 2356 | G | 2357 | cWW | tHW | tWW | cWW | cWW | |
| 4 | J3_5TBW_013 | 5TBW | 0.1895 | 1 | 1 | LSU rRNA | U | 2701 | A | 2702 | A | 2704 | A | 2705 | G | 2706 | * | C | 2664 | U | 2665 | C | 2666 | * | G | 2690 | A | 2691 | A | 2692 | ncSs | cWW | tHW | tWW | cWW | cWW |
| 5 | J3_4IOA_007 | 4IOA | 0.1994 | 1 | X | LSU rRNA | U | 2311 | A | 2312 | A | 2314 | A | 2315 | G | 2316 | * | C | 2274 | U | 2275 | C | 2276 | * | G | 2300 | A | 2301 | G | 2302 | cWW | tHW | ntWW | cWW | cWW | |
| 6 | J3_4Y4O_025 | 4Y4O | 0.1854 | 1 | 2A | LSU rRNA | U | 2332 | A | 2333 | A | 2335 | A | 2336 | G | 2337 | * | C | 2295 | U | 2296 | C | 2297 | * | G | 2321 | A | 2322 | G | 2323 | cWW | tHW | tWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUC*GAG*UAGAAG | 2 |
| CUA*UAG*CAUAAG | 1 |
| CUC*GAG*CAUAAG | 1 |
| CUC*GAG*CAAAAG | 1 |
| CUC*GAA*UAAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*A*AUAA | 2 |
| U*A*AAAA | 2 |
| U*A*AGAA | 2 |
Release history
| Release | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-02-09 | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
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- (6)
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Heat map statistics
- Min 0.13 | Avg 0.16 | Max 0.26
Coloring options: