1S34 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1S34_001 | 1/A/916:921 | No text annotation | ||
| HL_1S34_002 | 2/A/916:921 | No text annotation | ||
| HL_1S34_003 | 3/A/916:921 | Mini UNCG | geometric HL_6AAX_001 HL_12626.2 | |
| HL_1S34_004 | 4/A/916:921 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1S34_005 | 5/A/916:921 | No text annotation | geometric HL_7KI3_001 HL_75660.9 | |
| HL_1S34_006 | 6/A/916:921 | No text annotation | ||
| HL_1S34_007 | 7/A/916:921 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_1S34_008 | 8/A/916:921 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1S34_009 | 9/A/916:921 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1S34_010 | 10/A/916:921 | No text annotation | geometric HL_2ZNI_001 HL_75660.9 | |
| HL_1S34_011 | 11/A/916:921 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_1S34_012 | 12/A/916:921 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_1S34_013 | 13/A/916:921 | No text annotation | geometric HL_2Y9H_005 HL_44506.3 | |
| HL_1S34_014 | 14/A/916:921 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_1S34_015 | 15/A/916:921 | No text annotation | geometric HL_1WZ2_007 HL_75660.9 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1S34_001 | 1/A/912:914, 1/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_002 | 2/A/912:914, 2/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_003 | 3/A/912:914, 3/A/923:924 | Major groove intercalation | geometric IL_4YAZ_008 IL_71421.4 | |
| IL_1S34_004 | 4/A/912:914, 4/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_005 | 5/A/912:914, 5/A/923:924 | Minor groove platform | geometric IL_4V88_412 NA | |
| IL_1S34_006 | 6/A/912:914, 6/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_007 | 7/A/912:914, 7/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_008 | 8/A/912:914, 8/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_009 | 9/A/912:914, 9/A/923:924 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1S34_010 | 10/A/912:914, 10/A/923:924 | Single stack bend | geometric IL_7RQB_058 NA | |
| IL_1S34_011 | 11/A/912:914, 11/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_012 | 12/A/912:914, 12/A/923:924 | Minor groove platform related | geometric IL_7TZS_003 IL_34520.4 | |
| IL_1S34_013 | 13/A/912:914, 13/A/923:924 | Minor groove platform related | geometric IL_7TZS_003 IL_34520.4 | |
| IL_1S34_014 | 14/A/912:914, 14/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 | |
| IL_1S34_015 | 15/A/912:914, 15/A/923:924 | Single stack bend | geometric IL_4LFB_041 IL_15011.4 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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