2FMT Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2FMT_001 | 1/C/13:22 | tRNA D-loop | geometric HL_2ZZN_004 HL_57684.1 | |
| HL_2FMT_002 | 1/C/31:39 | No text annotation | geometric HL_4WF9_003 HL_75660.7 | |
| HL_2FMT_003 | 1/C/53:61 | No text annotation | geometric HL_5NFV_001 HL_69752.4 | |
| HL_2FMT_004 | 1/D/13:22 | tRNA D-loop | geometric HL_1GAX_004 NA | |
| HL_2FMT_005 | 1/D/31:39 | T-loop related | ||
| HL_2FMT_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_2FMT_001 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | tRNA junction | homologous J4_6CFJ_015 J4_95067.1 | |
| J4_2FMT_002 | 1/D/7:10, 1/D/25:27, 1/D/43:49, 1/D/65:66 | tRNA junction | homologous J4_6CFJ_015 J4_95067.1 |
Problematic loops
No problematic loops
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