2JUK Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2JUK_001 | 1/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_002 | 2/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_003 | 3/A/9:14 | No text annotation | geometric HL_3IGI_004 HL_04783.2 | |
| HL_2JUK_004 | 4/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_005 | 5/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_006 | 6/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_007 | 7/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_008 | 8/A/9:14 | No text annotation | geometric HL_3IGI_004 HL_04783.2 | |
| HL_2JUK_009 | 9/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_010 | 10/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_011 | 11/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_012 | 12/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_013 | 13/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_014 | 14/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_015 | 15/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_016 | 16/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_017 | 17/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_018 | 18/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_019 | 19/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 | |
| HL_2JUK_020 | 20/A/9:14 | GNRA related | geometric HL_5J7L_179 HL_04783.2 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2JUK_001 | Isolated non-canonical cWW pair | ||
| IL_2JUK_002 | Isolated non-canonical cWW pair | ||
| IL_2JUK_003 | Isolated non-canonical cWW pair | ||
| IL_2JUK_004 | Isolated non-canonical cWW pair | ||
| IL_2JUK_005 | No text annotation | ||
| IL_2JUK_006 | Tandem non-canonical cWW pairs | ||
| IL_2JUK_007 | Isolated non-canonical cWW pair | ||
| IL_2JUK_008 | No text annotation | ||
| IL_2JUK_009 | Isolated non-canonical cWW pair | ||
| IL_2JUK_010 | Isolated non-canonical cWW pair | ||
| IL_2JUK_011 | Isolated non-canonical cWW pair | ||
| IL_2JUK_012 | Isolated non-canonical cWW pair | ||
| IL_2JUK_013 | Isolated non-canonical cWW pair | ||
| IL_2JUK_014 | Isolated non-canonical cWW pair | ||
| IL_2JUK_015 | Isolated non-canonical cWW pair | ||
| IL_2JUK_016 | Isolated non-canonical cWW pair | ||
| IL_2JUK_017 | Isolated non-canonical cWW pair | ||
| IL_2JUK_018 | Isolated non-canonical cWW pair | ||
| IL_2JUK_019 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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