2O32 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2O32_021 | 1/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_022 | 2/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_023 | 3/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_024 | 4/A/8:13 | No text annotation | ||
| HL_2O32_025 | 5/A/8:13 | No text annotation | ||
| HL_2O32_026 | 6/A/8:13 | No text annotation | geometric HL_2Y8W_001 HL_40612.1 | |
| HL_2O32_027 | 7/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_028 | 8/A/8:13 | No text annotation | ||
| HL_2O32_029 | 9/A/8:13 | No text annotation | geometric HL_8C3A_039 NA | |
| HL_2O32_030 | 10/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_031 | 11/A/8:13 | No text annotation | ||
| HL_2O32_032 | 12/A/8:13 | No text annotation | ||
| HL_2O32_033 | 13/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_034 | 14/A/8:13 | No text annotation | ||
| HL_2O32_035 | 15/A/8:13 | No text annotation | ||
| HL_2O32_036 | 16/A/8:13 | No text annotation | ||
| HL_2O32_037 | 17/A/8:13 | No text annotation | ||
| HL_2O32_038 | 18/A/8:13 | No text annotation | geometric HL_8C3A_054 NA | |
| HL_2O32_039 | 19/A/8:13 | No text annotation | ||
| HL_2O32_040 | 20/A/8:13 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_2O32_001 | Externally structured | ||
| HL_2O32_002 | No text annotation | ||
| HL_2O32_003 | Externally structured | ||
| HL_2O32_004 | No text annotation | ||
| HL_2O32_005 | Externally structured | ||
| HL_2O32_006 | Externally structured | ||
| HL_2O32_007 | No text annotation | ||
| HL_2O32_008 | Externally structured | ||
| HL_2O32_009 | No text annotation | ||
| HL_2O32_010 | Externally structured | ||
| HL_2O32_011 | Externally structured | ||
| HL_2O32_012 | Externally structured | ||
| HL_2O32_013 | No text annotation | ||
| HL_2O32_014 | Externally structured | ||
| HL_2O32_015 | No text annotation | ||
| HL_2O32_016 | No text annotation | ||
| HL_2O32_017 | No text annotation | ||
| HL_2O32_018 | No text annotation | ||
| HL_2O32_019 | No text annotation | ||
| HL_2O32_020 | Externally structured |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2O32_041 | 1/A/3:5, 1/A/16:18 | Isolated non-canonical cWW pair | geometric IL_5J7L_050 NA | |
| IL_2O32_042 | 2/A/3:5, 2/A/16:18 | Isolated non-canonical cWW pair | geometric IL_9DFE_083 IL_71625.4 | |
| IL_2O32_023 | 3/A/3:5, 3/A/16:18 | Isolated non-canonical cWW pair | geometric IL_1Z7F_006 IL_01003.5 | |
| IL_2O32_024 | 4/A/3:5, 4/A/16:18 | Isolated non-canonical cWW pair | geometric IL_8VTW_082 NA | |
| IL_2O32_025 | 5/A/3:5, 5/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 | |
| IL_2O32_026 | 6/A/3:5, 6/A/16:18 | Isolated non-canonical cWW pair | geometric IL_8VTW_082 NA | |
| IL_2O32_043 | 7/A/3:5, 7/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4V9K_064 IL_01003.5 | |
| IL_2O32_028 | 8/A/3:5, 8/A/16:18 | Isolated non-canonical cWW pair | geometric IL_5J7L_050 NA | |
| IL_2O32_044 | 9/A/3:5, 9/A/16:18 | Isolated non-canonical cWW pair | geometric IL_7VYX_001 IL_01003.5 | |
| IL_2O32_030 | 10/A/3:5, 10/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 | |
| IL_2O32_031 | 11/A/3:5, 11/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 | |
| IL_2O32_045 | 12/A/3:5, 12/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 | |
| IL_2O32_033 | 13/A/3:5, 13/A/16:18 | Isolated non-canonical cWW pair | geometric IL_5J7L_050 NA | |
| IL_2O32_034 | 14/A/3:5, 14/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 | |
| IL_2O32_035 | 15/A/3:5, 15/A/16:18 | Isolated non-canonical cWW pair | geometric IL_6E7L_003 NA | |
| IL_2O32_046 | 16/A/3:5, 16/A/16:18 | Isolated non-canonical cWW pair | geometric IL_7VYX_001 IL_01003.5 | |
| IL_2O32_037 | 17/A/3:5, 17/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4LFB_047 IL_68118.5 | |
| IL_2O32_038 | 18/A/3:5, 18/A/16:18 | Isolated non-canonical cWW pair | geometric IL_8VTW_082 NA | |
| IL_2O32_047 | 19/A/3:5, 19/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4LFB_047 IL_68118.5 | |
| IL_2O32_040 | 20/A/3:5, 20/A/16:18 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_2O32_021 | Tandem non-canonical cWW pairs | ||
| IL_2O32_001 | Triple non-canonical cWW pairs | ||
| IL_2O32_022 | Tandem non-canonical cWW pairs | ||
| IL_2O32_002 | No text annotation | ||
| IL_2O32_003 | No text annotation | ||
| IL_2O32_004 | Double sheared with non-canonical cWW | ||
| IL_2O32_005 | No text annotation | ||
| IL_2O32_006 | No text annotation | ||
| IL_2O32_027 | Tandem non-canonical cWW pairs | ||
| IL_2O32_007 | Partly complementary | ||
| IL_2O32_008 | No text annotation | ||
| IL_2O32_029 | Tandem non-canonical cWW pairs | ||
| IL_2O32_009 | No text annotation | ||
| IL_2O32_010 | No text annotation | ||
| IL_2O32_011 | Partly complementary | ||
| IL_2O32_032 | Tandem non-canonical cWW pairs | ||
| IL_2O32_012 | Double sheared with non-canonical cWW | ||
| IL_2O32_013 | No text annotation | ||
| IL_2O32_014 | No text annotation | ||
| IL_2O32_015 | No text annotation | ||
| IL_2O32_036 | Tandem non-canonical cWW pairs | ||
| IL_2O32_016 | Partly complementary | ||
| IL_2O32_017 | Other IL | ||
| IL_2O32_018 | No text annotation | ||
| IL_2O32_039 | Tandem non-canonical cWW pairs | ||
| IL_2O32_019 | Double sheared with non-canonical cWW | ||
| IL_2O32_020 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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