2RPT Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_2RPT_001 | 1/A/8:13 | GNRA | geometric HL_3P22_001 HL_34789.5 | |
| HL_2RPT_002 | 2/A/8:13 | GNRA | geometric HL_3P22_001 HL_34789.5 | |
| HL_2RPT_003 | 3/A/8:13 | GNRA | geometric HL_3P22_001 HL_34789.5 | |
| HL_2RPT_004 | 4/A/8:13 | GNRA | geometric HL_5O7H_001 NA | |
| HL_2RPT_005 | 5/A/8:13 | GNRA | geometric HL_5O7H_001 NA | |
| HL_2RPT_006 | 6/A/8:13 | GNRA | geometric HL_3P22_001 HL_34789.5 | |
| HL_2RPT_007 | 7/A/8:13 | GNRA | geometric HL_3P22_001 HL_34789.5 | |
| HL_2RPT_008 | 8/A/8:13 | GNRA | geometric HL_3P22_001 HL_34789.5 | |
| HL_2RPT_009 | 9/A/8:13 | GNRA | geometric HL_5O7H_001 NA | |
| HL_2RPT_010 | 10/A/8:13 | GNRA | geometric HL_5O7H_001 NA |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_2RPT_001 | 1/A/4:6, 1/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4PDQ_004 IL_01003.5 | |
| IL_2RPT_002 | 2/A/4:6, 2/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4YHW_001 NA | |
| IL_2RPT_003 | 3/A/4:6, 3/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4YHW_001 NA | |
| IL_2RPT_004 | 4/A/4:6, 4/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4YHW_001 NA | |
| IL_2RPT_005 | 5/A/4:6, 5/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4YHW_001 NA | |
| IL_2RPT_006 | 6/A/4:6, 6/A/15:17 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_2RPT_007 | 7/A/4:6, 7/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4YHW_001 NA | |
| IL_2RPT_008 | 8/A/4:6, 8/A/15:17 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_2RPT_009 | 9/A/4:6, 9/A/15:17 | Isolated non-canonical cWW pair | geometric IL_5TBW_027 NA | |
| IL_2RPT_010 | 10/A/4:6, 10/A/15:17 | Isolated non-canonical cWW pair | geometric IL_4YHW_001 NA |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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